Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC009963.4-201ENST00000448535 339 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS50Q96JG6 RPL31P53-201ENST00000457065 348 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 TRBV8-1-201ENST00000481590 279 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 DEFB109A-201ENST00000482450 265 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC106806.2-201ENST00000509365 500 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AP003049.1-201ENST00000529418 457 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 AP006587.5-201ENST00000532033 739 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC025423.2-201ENST00000537570 439 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 LINC00557-201ENST00000563184 1279 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC090330.1-201ENST00000588646 764 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC073111.2-201ENST00000605657 1075 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC135803.1-201ENST00000608748 565 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC006249.1-201ENST00000621223 471 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 MIR6503-201ENST00000622884 86 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC006453.5-201ENST00000636451 619 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 AC007603.3-201ENST00000636915 979 ntBASIC6.45□□□□□ -1.38
VPS50Q96JG6 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS50Q96JG6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS50Q96JG6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS50Q96JG6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS50Q96JG6 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.45□□□□□ -1.38
VPS50Q96JG6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS50Q96JG6 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS50Q96JG6 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS50Q96JG6 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS50Q96JG6 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 Y_RNA.62-201ENST00000362840 99 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 AL451046.1-201ENST00000406097 534 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 AL358178.1-201ENST00000407698 397 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 RNA5SP155-201ENST00000411154 129 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 GTF3AP1-201ENST00000416942 1004 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 OR5W1P-201ENST00000423705 938 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 SETP9-201ENST00000423837 832 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 VN1R53P-201ENST00000429536 957 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 RPS10P21-201ENST00000430654 475 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC096632.2-201ENST00000438139 1239 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC074367.1-201ENST00000438685 1125 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 AL353718.1-201ENST00000451028 517 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 C1DP3-201ENST00000455013 423 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC004890.1-201ENST00000461005 181 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 RN7SL649P-201ENST00000496974 275 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 SNX18P23-201ENST00000510867 677 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC024267.2-201ENST00000582737 417 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC004908.1-201ENST00000606572 541 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC091768.1-201ENST00000609258 930 ntBASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms