Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SNORA74.1-201ENST00000516320 180 ntBASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 AC008429.4-201ENST00000521201 182 ntBASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PDLIM5Q96HC4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 DDX18P6-201ENST00000450119 1997 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 RNA5SP485-201ENST00000365053 119 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AL589994.1-201ENST00000404962 340 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 PPIAP32-201ENST00000449940 472 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 OR4D12P-201ENST00000509361 911 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AP001858.2-201ENST00000536213 601 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 MTND2P17-201ENST00000550281 688 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AC135626.1-201ENST00000556983 435 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 MIR212-201ENST00000586026 110 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AL589765.6-201ENST00000601909 549 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AC022001.1-201ENST00000605193 268 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 MIR6774-201ENST00000614651 70 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 MIR6811-201ENST00000620409 58 ntBASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM5Q96HC4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 NCOA4P2-201ENST00000340589 1813 ntBASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 RNU1-49P-201ENST00000363468 159 ntBASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 AL121835.1-201ENST00000404250 354 ntBASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 AL133260.1-201ENST00000405720 405 ntBASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 AL354707.3-201ENST00000427308 331 ntBASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 AC112492.2-201ENST00000432774 1030 ntBASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 PPIAP10-201ENST00000438675 458 ntBASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 MTND6P5-201ENST00000448266 512 ntBASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 AL359839.1-201ENST00000451975 1160 ntBASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 DEFB109A-201ENST00000482450 265 ntBASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 AL035690.1-201ENST00000490892 383 ntBASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.12□□□□□ -1.43
PDLIM5Q96HC4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms