Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 RNU6-316P-201ENST00000391027 107 ntBASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 VN1R12P-201ENST00000403778 876 ntBASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 RNA5SP115-201ENST00000411160 107 ntBASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 PSMD10P2-201ENST00000432890 672 ntBASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AC002553.3-201ENST00000453002 341 ntBASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AC103563.5-201ENST00000455643 364 ntBASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 RN7SL221P-201ENST00000466190 281 ntBASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AC002310.3-201ENST00000569728 723 ntBASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AP001437.1-201ENST00000608783 456 ntBASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 HSPD1P9-201ENST00000420325 1636 ntBASIC6.21□□□□□ -1.41
ECHDC3Q96DC8 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
ECHDC3Q96DC8 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
ECHDC3Q96DC8 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
ECHDC3Q96DC8 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.41
ECHDC3Q96DC8 AC096921.2-201ENST00000561507 1916 ntBASIC6.21□□□□□ -1.41
ECHDC3Q96DC8 AL033543.1-201ENST00000623440 13454 ntBASIC6.21□□□□□ -1.41
ECHDC3Q96DC8 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
ECHDC3Q96DC8 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 SNORD8-201ENST00000363915 110 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 SNORA51.9-201ENST00000384295 124 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 Z83838.1-202ENST00000456225 839 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 CR383658.1-201ENST00000514609 734 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 RN7SKP35-201ENST00000517210 151 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AC092865.1-201ENST00000544395 1023 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AC092332.1-201ENST00000563684 829 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AL512652.1-201ENST00000619006 500 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 FAM27E2-201ENST00000619668 403 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AL137067.2-201ENST00000621202 131 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AL161901.1-201ENST00000624954 3425 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 AC022325.1-201ENST00000502748 2199 ntBASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
ECHDC3Q96DC8 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AL359091.1-201ENST00000449048 1734 ntBASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC023141.3-201ENST00000436698 278 ntBASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC021269.1-201ENST00000526860 705 ntBASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC007346.1-201ENST00000569208 867 ntBASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC134669.1-201ENST00000581275 672 ntBASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms