Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 EIF4A1P2-201ENST00000422633 1220 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-CQ95604 DSTNP5-201ENST00000427921 523 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.41□□□□□ -1.06
HLA-CQ95604 MYO5BP3-201ENST00000431872 1279 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
HLA-CQ95604 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.41□□□□□ -1.06
HLA-CQ95604 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC8.41□□□□□ -1.06
HLA-CQ95604 RPL29P7-201ENST00000440227 457 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 FO393419.1-201ENST00000443746 355 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC8.41□□□□□ -1.06
HLA-CQ95604 VDAC2P4-201ENST00000452925 711 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 RPS29P25-201ENST00000481709 171 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-CQ95604 RNU6-430P-201ENST00000517078 107 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 IGLV1-41-201ENST00000519790 406 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 AC087276.1-201ENST00000529659 480 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 OR4C2P-201ENST00000530855 1064 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.41□□□□□ -1.06
HLA-CQ95604 AC069240.2-201ENST00000550242 609 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-CQ95604 AC142086.3-201ENST00000563896 802 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 RN7SL154P-201ENST00000578043 324 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.41□□□□□ -1.06
HLA-CQ95604 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC8.41□□□□□ -1.06
HLA-CQ95604 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.41□□□□□ -1.06
HLA-CQ95604 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.41□□□□□ -1.06
HLA-CQ95604 AL021918.1-201ENST00000603933 236 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 AC019193.2-201ENST00000610012 634 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
HLA-CQ95604 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-CQ95604 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-CQ95604 HCG18-242ENST00000602319 3342 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-CQ95604 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
HLA-CQ95604 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-CQ95604 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
HLA-CQ95604 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
HLA-CQ95604 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-CQ95604 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
HLA-CQ95604 AC022182.3-201ENST00000529239 2167 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.41□□□□□ -1.06
HLA-CQ95604 AC011297.1-201ENST00000620503 2110 ntBASIC8.41□□□□□ -1.06
HLA-CQ95604 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HLA-CQ95604 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC8.41□□□□□ -1.06
HLA-CQ95604 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-CQ95604 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.4□□□□□ -1.06
HLA-CQ95604 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
HLA-CQ95604 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-CQ95604 PDPN-212ENST00000621990 2738 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-CQ95604 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-CQ95604 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-CQ95604 AP002765.1-201ENST00000528675 1507 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 TCTN3-203ENST00000371217 2514 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-CQ95604 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-CQ95604 TRIM60P14-201ENST00000513444 1419 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 TARID-209ENST00000630119 4294 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-CQ95604 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
HLA-CQ95604 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
HLA-CQ95604 SLFN13-210ENST00000534689 3058 ntTSL 2 BASIC8.4□□□□□ -1.06
HLA-CQ95604 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
HLA-CQ95604 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
HLA-CQ95604 AL512422.1-201ENST00000407033 553 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 SOD1P1-201ENST00000407803 440 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.4□□□□□ -1.06
HLA-CQ95604 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC8.4□□□□□ -1.06
HLA-CQ95604 VN1R36P-201ENST00000414936 291 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 AC023141.10-201ENST00000415634 200 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC8.4□□□□□ -1.06
HLA-CQ95604 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8.4□□□□□ -1.06
HLA-CQ95604 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.4□□□□□ -1.06
HLA-CQ95604 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC8.4□□□□□ -1.06
HLA-CQ95604 PGAM1P3-201ENST00000420790 565 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 SNX18P3-201ENST00000424993 835 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 AC073464.1-201ENST00000429823 534 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC8.4□□□□□ -1.06
HLA-CQ95604 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
HLA-CQ95604 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC8.4□□□□□ -1.06
HLA-CQ95604 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC8.4□□□□□ -1.06
HLA-CQ95604 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.4□□□□□ -1.06
HLA-CQ95604 EIF3LP3-201ENST00000495197 822 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 RPL23AP80-201ENST00000495605 424 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 SAP18P1-201ENST00000512058 390 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.4□□□□□ -1.06
HLA-CQ95604 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC8.4□□□□□ -1.06
HLA-CQ95604 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC8.4□□□□□ -1.06
HLA-CQ95604 FOLH1B-202ENST00000529567 2145 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 AP003072.1-201ENST00000531740 145 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 AC078962.3-201ENST00000545821 482 ntTSL 5 BASIC8.4□□□□□ -1.06
HLA-CQ95604 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.4□□□□□ -1.06
HLA-CQ95604 RPS3AP23-202ENST00000574601 686 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.4□□□□□ -1.06
HLA-CQ95604 NRBF2P5-201ENST00000603087 788 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 AL161729.4-201ENST00000604650 476 ntBASIC8.4□□□□□ -1.06
HLA-CQ95604 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.4□□□□□ -1.06
HLA-CQ95604 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.4□□□□□ -1.06
HLA-CQ95604 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC8.4□□□□□ -1.06
HLA-CQ95604 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8.4□□□□□ -1.06
HLA-CQ95604 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms