Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGB4Q8WW32 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC005522.1-201ENST00000395416 346 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 OR1F12-201ENST00000402365 945 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 RCC2P2-201ENST00000422174 918 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 SEPT14P12-201ENST00000442280 560 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 RPL6P30-201ENST00000443382 862 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC117525.1-201ENST00000515228 503 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC027369.2-201ENST00000528030 440 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 CYCSP38-201ENST00000559840 322 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 BUB1P1-201ENST00000603541 607 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC092953.2-201ENST00000608000 699 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC092681.3-201ENST00000609463 678 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AP001264.1-201ENST00000620602 703 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC034229.6-201ENST00000623704 224 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC120057.5-201ENST00000623840 154 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 SNX18P12-201ENST00000624821 759 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC080188.3-201ENST00000624842 748 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AC027575.3-201ENST00000583058 2747 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 AL049634.1-201ENST00000453770 1720 ntBASIC6.49□□□□□ -1.37
HMGB4Q8WW32 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
HMGB4Q8WW32 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AL137058.3-201ENST00000624531 3099 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC241584.2-201ENST00000637142 2090 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC114876.1-201ENST00000490962 1366 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 CUL4AP1-201ENST00000514750 1863 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AL139384.2-201ENST00000613809 3590 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AL589655.1-201ENST00000405398 482 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 RN7SKP108-201ENST00000411367 328 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC096644.3-201ENST00000416788 338 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AL390879.2-203ENST00000426943 1121 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC112492.2-201ENST00000432774 1030 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 MED28P4-201ENST00000433137 572 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC104109.1-201ENST00000498563 436 ntBASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGB4Q8WW32 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms