Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 NF1P8-201ENST00000415351 1461 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 MTND5P12-201ENST00000502851 1449 ntBASIC7.52□□□□□ -1.2
SHKBP1Q8TBC3 AC004520.1-201ENST00000608362 1413 ntBASIC7.52□□□□□ -1.2
SHKBP1Q8TBC3 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.52□□□□□ -1.2
SHKBP1Q8TBC3 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SHKBP1Q8TBC3 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 CR848007.1-201ENST00000442354 1699 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC009501.3-201ENST00000605001 1352 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC119674.1-213ENST00000641177 1386 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 PPIAP22-201ENST00000358455 498 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 Y_RNA.88-201ENST00000363029 99 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 RNU6-618P-201ENST00000363518 112 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 RN7SKP174-201ENST00000363803 330 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 RNA5SP472-201ENST00000363868 119 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 MIR99A-201ENST00000384906 81 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC091492.1-201ENST00000419844 272 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AL590004.3-202ENST00000445883 451 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 RPSAP7-201ENST00000456871 885 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 RPS4XP17-201ENST00000479057 754 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 OR7E10P-201ENST00000526420 991 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC021749.1-201ENST00000604322 607 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC108747.1-201ENST00000609508 535 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC025016.1-201ENST00000616746 682 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC007742.2-201ENST00000618226 398 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 HYDIN2-203ENST00000614586 13885 ntBASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.52□□□□□ -1.21
SHKBP1Q8TBC3 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 AC009220.2-201ENST00000489759 1751 ntBASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 EIF3EP2-201ENST00000423042 1814 ntBASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 Y_RNA.6-201ENST00000362350 114 ntBASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 RNU6-797P-201ENST00000363101 109 ntBASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 RN7SKP55-201ENST00000364888 307 ntBASIC7.51□□□□□ -1.21
SHKBP1Q8TBC3 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms