Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 TRGV5P-201ENST00000419915 354 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 RPSAP40-201ENST00000442343 891 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 OR13K1P-201ENST00000444577 975 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 OR52I1-201ENST00000450052 1050 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 RN7SL170P-201ENST00000487098 295 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AC090958.1-201ENST00000511122 351 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AC011853.1-201ENST00000518911 454 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AC026826.3-201ENST00000561747 158 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 NPIPB1P-202ENST00000588786 828 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AL034374.2-201ENST00000605281 548 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AL021368.3-201ENST00000607119 578 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 HDAC1P2-201ENST00000453661 1398 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 RPS2P45-201ENST00000469997 2057 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 ZNF658B-201ENST00000602828 3408 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 ZNF969P-201ENST00000510345 2341 ntBASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
C9orf40Q8IXQ3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC092692.1-201ENST00000623625 2595 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC090142.2-201ENST00000483263 416 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AOX3P-204ENST00000491025 2107 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 RNA5SP434-201ENST00000516647 121 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC021269.1-201ENST00000526860 705 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC006512.2-201ENST00000543250 486 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 OR4H6P-201ENST00000563771 921 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC008555.7-201ENST00000605008 583 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC073389.3-201ENST00000609434 935 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC097641.3-201ENST00000613523 464 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 RFPL4AP6-201ENST00000616792 846 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC004836.1-201ENST00000623032 634 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC073593.1-201ENST00000624500 411 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AC011416.1-201ENST00000514947 1732 ntBASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.73□□□□□ -1.49
C9orf40Q8IXQ3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC011504.1-201ENST00000623331 4103 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 AC096921.2-201ENST00000561507 1916 ntBASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf40Q8IXQ3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms