Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MTATP6P11-201ENST00000428071 670 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 MTND4LP14-201ENST00000429447 288 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 GTF3AP6-201ENST00000432585 986 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 RN7SL39P-201ENST00000462264 297 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC026254.2-201ENST00000475295 371 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC022206.1-201ENST00000495947 347 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 ACTR6P1-201ENST00000514311 1104 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AL133399.1-201ENST00000527476 298 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AP003033.2-201ENST00000528901 805 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 OR52K3P-201ENST00000531655 943 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC008126.1-201ENST00000549019 480 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC063977.7-201ENST00000594454 337 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AL589765.6-201ENST00000601909 549 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC011500.1-201ENST00000601963 469 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC139493.1-201ENST00000604368 397 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 MIR6889-201ENST00000613185 59 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 LINC00216-201ENST00000623548 1126 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC025262.3-201ENST00000623666 360 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 LINC02495-203ENST00000636704 242 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC245100.2-201ENST00000454544 1679 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 AC003985.2-201ENST00000562268 1669 ntBASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LRRTM4Q86VH4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 RNA5SP188-201ENST00000362916 129 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 SNORA27.3-201ENST00000364937 134 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AL023284.3-201ENST00000407767 334 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 MRPS33P4-201ENST00000434892 317 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 CLNS1AP1-201ENST00000435954 682 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 PMS2P9-201ENST00000441237 515 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 SEPT14P12-201ENST00000442280 560 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AC011742.2-201ENST00000443818 352 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AC005165.2-201ENST00000466070 380 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 RNU6-491P-201ENST00000516099 110 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AL592494.3-201ENST00000609485 464 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AL121936.2-201ENST00000641935 662 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AL356317.1-201ENST00000396110 1436 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 MAPK10-287ENST00000641217 3037 ntBASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LRRTM4Q86VH4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.37□□□□□ -1.39
LRRTM4Q86VH4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
LRRTM4Q86VH4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
LRRTM4Q86VH4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LRRTM4Q86VH4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.37□□□□□ -1.39
LRRTM4Q86VH4 SAGE3P-201ENST00000619800 1635 ntBASIC6.37□□□□□ -1.39
LRRTM4Q86VH4 AC022507.1-201ENST00000548349 1505 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms