Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 AC134669.1-201ENST00000581275 672 ntBASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 SNORA74.4-201ENST00000607595 199 ntBASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 AC022106.1-201ENST00000612834 766 ntBASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 AC097641.3-201ENST00000613523 464 ntBASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 AC105235.1-201ENST00000623208 1816 ntBASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 AC092070.2-203ENST00000598377 3644 ntBASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 EIF3EP1-201ENST00000433978 1316 ntBASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 OFD1P17-201ENST00000437639 3018 ntBASIC6.5□□□□□ -1.37
RFWD3Q6PCD5 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 OR56A4-201ENST00000330728 1209 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 TMA16P2-201ENST00000413187 601 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 PCNPP2-201ENST00000441651 455 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 RN7SL165P-201ENST00000477476 291 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 RN7SL326P-201ENST00000477493 296 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 KHDC1P1-201ENST00000511053 508 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 RN7SKP67-201ENST00000515905 235 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 AC026826.3-201ENST00000561747 158 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 AC009120.3-201ENST00000563335 499 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 AP005136.2-201ENST00000583253 1049 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 AL499605.1-201ENST00000604628 403 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 MIR6071-201ENST00000616741 78 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 MIR7159-201ENST00000620587 66 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 GUCY1B2-204ENST00000531898 1979 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 IFIT1P1-201ENST00000400497 1449 ntBASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.49□□□□□ -1.37
RFWD3Q6PCD5 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 RNA5SP110-201ENST00000362638 115 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 RNA5SP478-201ENST00000364657 115 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AL360271.1-201ENST00000395679 510 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 OR7E156P-201ENST00000400303 464 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 PSMD10P2-201ENST00000432890 672 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC007679.3-201ENST00000434035 414 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 RPL5P7-201ENST00000444235 813 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AL590004.3-202ENST00000445883 451 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC092967.1-201ENST00000449016 481 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 RPL34P33-201ENST00000486062 334 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AP005639.1-201ENST00000526939 192 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC005363.1-201ENST00000530779 351 ntBASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.48□□□□□ -1.37
RFWD3Q6PCD5 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms