Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CCDC144NLQ6NUI1 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC144NLQ6NUI1 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC144NLQ6NUI1 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC015871.3-201ENST00000618835 2261 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 RNA5SP302-201ENST00000364896 100 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 RNU6-207P-201ENST00000384137 107 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 RNU6-1005P-201ENST00000384519 107 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 RNA5SP35-201ENST00000391257 129 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 HNRNPH1P2-201ENST00000396845 1210 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AL121977.1-201ENST00000401636 979 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 SNORA79B-201ENST00000410557 148 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 RPA2P2-201ENST00000419698 796 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 NME1P1-201ENST00000420914 382 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 GAS5-211ENST00000432536 959 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 PA2G4P6-201ENST00000438325 1197 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AL592114.2-201ENST00000440142 532 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 GAPDHP16-201ENST00000448152 962 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AL390728.3-201ENST00000452704 270 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC135721.2-201ENST00000464237 300 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC021074.2-201ENST00000468434 172 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC020779.1-201ENST00000478757 796 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 RN7SL868P-201ENST00000485915 303 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 OR11I1P-201ENST00000486033 954 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC095057.1-201ENST00000507583 168 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 RN7SKP11-201ENST00000517018 287 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AP002004.1-206ENST00000532441 876 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 NXPE2P1-201ENST00000543705 726 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 MIR4509-3-201ENST00000578671 94 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 MIR4509-2-201ENST00000583920 94 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC090774.2-201ENST00000584708 322 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC010463.3-201ENST00000594077 500 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 SIGLEC31P-201ENST00000594237 551 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 CLIC4P2-201ENST00000601934 717 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AL512430.4-201ENST00000603085 613 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC112220.2-201ENST00000605513 533 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 MIR8082-201ENST00000612488 81 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 MIR4509-1-201ENST00000618224 94 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC009120.7-201ENST00000623452 780 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 CASC19-274ENST00000642018 970 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AL022323.4-201ENST00000623980 13120 ntBASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144NLQ6NUI1 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms