Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 PPIAP24-201ENST00000328558 471 ntBASIC5.91□□□□□ -1.46
LTBQ06643 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LTBQ06643 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.91□□□□□ -1.46
LTBQ06643 SNORA51.1-201ENST00000363243 140 ntBASIC5.91□□□□□ -1.46
LTBQ06643 RNA5SP140-201ENST00000364524 92 ntBASIC5.91□□□□□ -1.46
LTBQ06643 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.91□□□□□ -1.46
LTBQ06643 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LTBQ06643 FDPSP5-201ENST00000399474 1057 ntBASIC5.91□□□□□ -1.46
LTBQ06643 AL136116.2-201ENST00000404020 785 ntBASIC5.91□□□□□ -1.46
LTBQ06643 AL451046.1-201ENST00000406097 534 ntBASIC5.91□□□□□ -1.46
LTBQ06643 AL023284.3-201ENST00000407767 334 ntBASIC5.91□□□□□ -1.46
LTBQ06643 RNA5SP431-201ENST00000410312 120 ntBASIC5.91□□□□□ -1.46
LTBQ06643 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LTBQ06643 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.91□□□□□ -1.46
LTBQ06643 HSFY7P-201ENST00000432672 318 ntBASIC5.91□□□□□ -1.46
LTBQ06643 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.91□□□□□ -1.46
LTBQ06643 HSFY8P-201ENST00000437934 318 ntBASIC5.91□□□□□ -1.46
LTBQ06643 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.91□□□□□ -1.46
LTBQ06643 VN1R96P-201ENST00000446052 858 ntBASIC5.91□□□□□ -1.46
LTBQ06643 VN1R48P-201ENST00000448149 1036 ntBASIC5.91□□□□□ -1.46
LTBQ06643 HSFY5P-201ENST00000453726 309 ntBASIC5.91□□□□□ -1.46
LTBQ06643 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.91□□□□□ -1.46
LTBQ06643 AC093719.1-201ENST00000480427 441 ntBASIC5.91□□□□□ -1.46
LTBQ06643 RPL5P14-201ENST00000494197 878 ntBASIC5.91□□□□□ -1.46
LTBQ06643 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
LTBQ06643 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.91□□□□□ -1.46
LTBQ06643 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.91□□□□□ -1.46
LTBQ06643 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.91□□□□□ -1.46
LTBQ06643 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.91□□□□□ -1.46
LTBQ06643 AC008429.2-201ENST00000523057 864 ntBASIC5.91□□□□□ -1.46
LTBQ06643 AC084337.1-201ENST00000524809 686 ntBASIC5.91□□□□□ -1.46
LTBQ06643 AC023245.2-201ENST00000530760 2978 ntBASIC5.91□□□□□ -1.46
LTBQ06643 AC006512.2-201ENST00000543250 486 ntBASIC5.91□□□□□ -1.46
LTBQ06643 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.91□□□□□ -1.46
LTBQ06643 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.91□□□□□ -1.46
LTBQ06643 NPM1P45-201ENST00000583151 559 ntBASIC5.91□□□□□ -1.46
LTBQ06643 RPL29P33-201ENST00000587474 316 ntBASIC5.91□□□□□ -1.46
LTBQ06643 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.91□□□□□ -1.46
LTBQ06643 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.91□□□□□ -1.46
LTBQ06643 AC011458.1-201ENST00000604034 617 ntBASIC5.91□□□□□ -1.46
LTBQ06643 AC008555.7-201ENST00000605008 583 ntBASIC5.91□□□□□ -1.46
LTBQ06643 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.91□□□□□ -1.46
LTBQ06643 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.91□□□□□ -1.46
LTBQ06643 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.91□□□□□ -1.46
LTBQ06643 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.91□□□□□ -1.46
LTBQ06643 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
LTBQ06643 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LTBQ06643 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LTBQ06643 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LTBQ06643 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LTBQ06643 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.91□□□□□ -1.46
LTBQ06643 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LTBQ06643 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LTBQ06643 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.91□□□□□ -1.46
LTBQ06643 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LTBQ06643 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LTBQ06643 AC010401.2-201ENST00000575137 4934 ntBASIC5.91□□□□□ -1.46
LTBQ06643 EPS15P1-202ENST00000459691 2071 ntBASIC5.9□□□□□ -1.46
LTBQ06643 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.9□□□□□ -1.46
LTBQ06643 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
LTBQ06643 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LTBQ06643 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LTBQ06643 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LTBQ06643 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.9□□□□□ -1.46
LTBQ06643 TMEM75-201ENST00000624314 2165 ntBASIC5.9□□□□□ -1.46
LTBQ06643 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.9□□□□□ -1.46
LTBQ06643 AC011592.1-201ENST00000624647 3634 ntBASIC5.9□□□□□ -1.46
LTBQ06643 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LTBQ06643 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.9□□□□□ -1.46
LTBQ06643 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
LTBQ06643 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LTBQ06643 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LTBQ06643 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LTBQ06643 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
LTBQ06643 RNA5SP308-201ENST00000362532 115 ntBASIC5.9□□□□□ -1.46
LTBQ06643 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.9□□□□□ -1.46
LTBQ06643 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.9□□□□□ -1.46
LTBQ06643 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
LTBQ06643 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LTBQ06643 RNU6-1176P-201ENST00000390955 107 ntBASIC5.9□□□□□ -1.46
LTBQ06643 RPL5P20-201ENST00000403848 896 ntBASIC5.9□□□□□ -1.46
LTBQ06643 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.9□□□□□ -1.46
LTBQ06643 Z68694.1-201ENST00000413929 841 ntBASIC5.9□□□□□ -1.46
LTBQ06643 AL359092.1-201ENST00000417156 265 ntBASIC5.9□□□□□ -1.46
LTBQ06643 AC097721.1-201ENST00000427150 1253 ntBASIC5.9□□□□□ -1.46
LTBQ06643 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.9□□□□□ -1.46
LTBQ06643 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.9□□□□□ -1.46
LTBQ06643 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.9□□□□□ -1.46
LTBQ06643 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.9□□□□□ -1.46
LTBQ06643 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.9□□□□□ -1.46
LTBQ06643 AC074386.1-201ENST00000476560 767 ntBASIC5.9□□□□□ -1.46
LTBQ06643 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.9□□□□□ -1.46
LTBQ06643 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.9□□□□□ -1.46
LTBQ06643 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.9□□□□□ -1.46
LTBQ06643 AC018797.1-201ENST00000510791 255 ntBASIC5.9□□□□□ -1.46
LTBQ06643 SCARNA5-201ENST00000516201 276 ntBASIC5.9□□□□□ -1.46
LTBQ06643 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.9□□□□□ -1.46
LTBQ06643 AC026956.1-201ENST00000558741 396 ntBASIC5.9□□□□□ -1.46
LTBQ06643 OR1E3-201ENST00000575608 948 ntBASIC5.9□□□□□ -1.46
LTBQ06643 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms