Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 BZW1P1-201ENST00000454901 1240 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.12□□□□□ -1.43
CLRN1P58418 RPS4XP19-201ENST00000460237 736 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 AC135999.1-201ENST00000478962 479 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 RN7SL518P-201ENST00000491887 280 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 OR10J9P-201ENST00000511932 987 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.12□□□□□ -1.43
CLRN1P58418 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.12□□□□□ -1.43
CLRN1P58418 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.12□□□□□ -1.43
CLRN1P58418 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.12□□□□□ -1.43
CLRN1P58418 AP001994.1-201ENST00000527539 826 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 SSU72P6-201ENST00000532644 488 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.12□□□□□ -1.43
CLRN1P58418 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.12□□□□□ -1.43
CLRN1P58418 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.12□□□□□ -1.43
CLRN1P58418 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CLRN1P58418 CYB5AP5-201ENST00000549779 389 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 QRSL1P3-201ENST00000552666 1316 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.12□□□□□ -1.43
CLRN1P58418 AL591767.3-201ENST00000554632 525 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 FAM30C-201ENST00000561158 410 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 RN7SL199P-201ENST00000578752 281 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 RN7SL656P-201ENST00000579044 281 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 RN7SL404P-201ENST00000582421 281 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.12□□□□□ -1.43
CLRN1P58418 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 AC073387.2-201ENST00000604797 784 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 AP004372.1-201ENST00000604842 844 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 AL132656.3-201ENST00000606384 1595 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 AC015922.4-201ENST00000612568 690 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.12□□□□□ -1.43
CLRN1P58418 AC011815.2-201ENST00000618230 2021 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 AC131009.3-201ENST00000621809 287 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CLRN1P58418 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.12□□□□□ -1.43
CLRN1P58418 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 AC011592.1-201ENST00000624647 3634 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 MAPK10-383ENST00000642032 3390 ntBASIC6.12□□□□□ -1.43
CLRN1P58418 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.12□□□□□ -1.43
CLRN1P58418 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.12□□□□□ -1.43
CLRN1P58418 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLRN1P58418 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CLRN1P58418 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CLRN1P58418 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 ATP5BP1-201ENST00000411980 1574 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 AL359715.4-201ENST00000606629 1436 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 MTND4P8-201ENST00000514997 1362 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.11□□□□□ -1.43
CLRN1P58418 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 RNU6-252P-201ENST00000363232 107 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 RNU4-28P-201ENST00000364739 141 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 PDCL3P5-201ENST00000398028 722 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 GSTA12P-201ENST00000402398 508 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.11□□□□□ -1.43
CLRN1P58418 RN7SKP97-201ENST00000410966 333 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.11□□□□□ -1.43
CLRN1P58418 MTCO3P4-201ENST00000419236 787 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 GLUD1P9-201ENST00000420997 1173 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 OR2X1P-201ENST00000421144 687 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 DEFB130D-201ENST00000426866 237 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC009362.1-201ENST00000427253 406 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC046176.1-201ENST00000435260 1170 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms