Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
GFRA1P56159 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.55□□□□□ -1.36
GFRA1P56159 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
GFRA1P56159 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.55□□□□□ -1.36
GFRA1P56159 AL137918.1-201ENST00000624542 1922 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 HCG18-244ENST00000602516 2890 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
GFRA1P56159 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 AC023886.2-201ENST00000321285 411 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 SETP15-201ENST00000412724 337 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AL157698.1-201ENST00000415190 1011 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 AL161742.1-201ENST00000418154 584 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.55□□□□□ -1.36
GFRA1P56159 AL034379.1-201ENST00000423216 253 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.55□□□□□ -1.36
GFRA1P56159 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.55□□□□□ -1.36
GFRA1P56159 AL589823.1-201ENST00000429577 183 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AC104698.1-201ENST00000435671 276 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.55□□□□□ -1.36
GFRA1P56159 RPL29P7-201ENST00000440227 457 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 CYCSP44-201ENST00000448560 313 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 NPM1P13-201ENST00000452663 865 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 OSTCP1-201ENST00000455507 450 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AC107015.1-201ENST00000466902 747 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AC079080.1-201ENST00000479841 822 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 RPS7P11-201ENST00000484240 586 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 AC091860.1-201ENST00000505723 432 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.55□□□□□ -1.36
GFRA1P56159 snoZ278.1-201ENST00000517059 112 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.55□□□□□ -1.36
GFRA1P56159 RPL10P18-201ENST00000519384 309 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.55□□□□□ -1.36
GFRA1P56159 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 OR11H3P-201ENST00000554547 982 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.55□□□□□ -1.36
GFRA1P56159 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.55□□□□□ -1.36
GFRA1P56159 AC095057.3-201ENST00000567102 1157 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.55□□□□□ -1.36
GFRA1P56159 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.55□□□□□ -1.36
GFRA1P56159 RPSAP66-201ENST00000592196 606 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC6.55□□□□□ -1.36
GFRA1P56159 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.55□□□□□ -1.36
GFRA1P56159 AC073488.2-201ENST00000631903 751 ntBASIC6.55□□□□□ -1.36
GFRA1P56159 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.55□□□□□ -1.36
GFRA1P56159 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
GFRA1P56159 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
GFRA1P56159 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
GFRA1P56159 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 AC009166.2-201ENST00000624410 2833 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC6.54□□□□□ -1.36
GFRA1P56159 MFSD8-256ENST00000641949 1640 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
GFRA1P56159 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 AL355974.1-201ENST00000618896 1708 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
GFRA1P56159 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms