Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LIMK1P53667 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LIMK1P53667 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.44□□□□□ -1.38
LIMK1P53667 AL663061.1-201ENST00000416625 580 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.44□□□□□ -1.38
LIMK1P53667 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.44□□□□□ -1.38
LIMK1P53667 IGLV3-4-201ENST00000432300 244 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 EMC3-AS1-205ENST00000438698 534 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.44□□□□□ -1.38
LIMK1P53667 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.44□□□□□ -1.38
LIMK1P53667 AL645936.1-201ENST00000441979 518 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 AL034399.1-201ENST00000451535 380 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 HLA-DPA3-207ENST00000454398 229 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.44□□□□□ -1.38
LIMK1P53667 RPS4XP23-201ENST00000487801 237 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 MTND6P8-201ENST00000503471 522 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 OR7E99P-201ENST00000505750 922 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 RNA5SP418-201ENST00000515951 117 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.44□□□□□ -1.38
LIMK1P53667 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.44□□□□□ -1.38
LIMK1P53667 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
LIMK1P53667 U1.41-201ENST00000617626 165 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 OR7E91P-202ENST00000642062 1198 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
LIMK1P53667 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.44□□□□□ -1.38
LIMK1P53667 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LIMK1P53667 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.44□□□□□ -1.38
LIMK1P53667 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.44□□□□□ -1.38
LIMK1P53667 SAMMSON-210ENST00000641260 1308 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.44□□□□□ -1.38
LIMK1P53667 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.44□□□□□ -1.38
LIMK1P53667 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 UG0898H09-202ENST00000623646 7040 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 AP000547.3-204ENST00000588548 2523 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
LIMK1P53667 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
LIMK1P53667 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.43□□□□□ -1.38
LIMK1P53667 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
LIMK1P53667 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.43□□□□□ -1.38
LIMK1P53667 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.43□□□□□ -1.38
LIMK1P53667 Z95114.1-201ENST00000624264 14574 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.43□□□□□ -1.38
LIMK1P53667 RN7SKP62-201ENST00000384539 329 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 AL590762.1-201ENST00000391782 432 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 SNORA81-201ENST00000408493 178 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 RN7SKP278-201ENST00000410504 342 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 RNU4-64P-201ENST00000410795 131 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 AC013268.2-201ENST00000420753 337 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.43□□□□□ -1.38
LIMK1P53667 CXCR2P1-202ENST00000443392 1074 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.43□□□□□ -1.38
LIMK1P53667 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.43□□□□□ -1.38
LIMK1P53667 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.43□□□□□ -1.38
LIMK1P53667 PPP1R11P1-201ENST00000486095 376 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 AC063943.2-201ENST00000495697 534 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.43□□□□□ -1.38
LIMK1P53667 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.43□□□□□ -1.38
LIMK1P53667 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.43□□□□□ -1.38
LIMK1P53667 AC006499.4-201ENST00000510947 694 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 SCARNA5-201ENST00000516201 276 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 SNORA26.10-201ENST00000516427 141 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.43□□□□□ -1.38
LIMK1P53667 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
LIMK1P53667 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.43□□□□□ -1.38
LIMK1P53667 AP000662.1-201ENST00000530952 487 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.43□□□□□ -1.38
LIMK1P53667 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.43□□□□□ -1.38
LIMK1P53667 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.43□□□□□ -1.38
LIMK1P53667 AC020978.7-201ENST00000575953 1187 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.43□□□□□ -1.38
LIMK1P53667 AC125494.2-201ENST00000602431 657 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.43□□□□□ -1.38
LIMK1P53667 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LIMK1P53667 SNX18P3-202ENST00000565670 1750 ntBASIC6.43□□□□□ -1.38
LIMK1P53667 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
LIMK1P53667 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
LIMK1P53667 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
LIMK1P53667 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms