Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RNA5SP350-201ENST00000363298 111 ntBASIC10.65□□□□□ -0.7
SMARCA4P51532 RNA5SP131-201ENST00000365452 119 ntBASIC10.65□□□□□ -0.7
SMARCA4P51532 TPT1-204ENST00000379060 764 ntTSL 5 BASIC10.65□□□□□ -0.7
SMARCA4P51532 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC10.65□□□□□ -0.7
SMARCA4P51532 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC10.65□□□□□ -0.7
SMARCA4P51532 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC10.65□□□□□ -0.7
SMARCA4P51532 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC10.65□□□□□ -0.7
SMARCA4P51532 SUGT1P3-202ENST00000604259 383 ntBASIC10.65□□□□□ -0.7
SMARCA4P51532 AC024255.1-201ENST00000614376 102 ntBASIC10.65□□□□□ -0.7
SMARCA4P51532 AL139099.4-201ENST00000614802 114 ntBASIC10.65□□□□□ -0.7
SMARCA4P51532 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC10.65□□□□□ -0.71
SMARCA4P51532 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SMARCA4P51532 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SMARCA4P51532 MAPK10-323ENST00000641493 3207 ntBASIC10.65□□□□□ -0.71
SMARCA4P51532 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SMARCA4P51532 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SMARCA4P51532 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
SMARCA4P51532 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SMARCA4P51532 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA4P51532 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA4P51532 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC10.64□□□□□ -0.71
SMARCA4P51532 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 RPS26P41-201ENST00000450370 284 ntBASIC10.64□□□□□ -0.71
SMARCA4P51532 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC10.64□□□□□ -0.71
SMARCA4P51532 CBX1P5-201ENST00000475330 559 ntBASIC10.64□□□□□ -0.71
SMARCA4P51532 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA4P51532 AC105420.1-201ENST00000504389 582 ntBASIC10.64□□□□□ -0.71
SMARCA4P51532 AC021146.10-201ENST00000515628 706 ntBASIC10.64□□□□□ -0.71
SMARCA4P51532 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
SMARCA4P51532 IGHV1-14-201ENST00000523391 241 ntBASIC10.64□□□□□ -0.71
SMARCA4P51532 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC10.64□□□□□ -0.71
SMARCA4P51532 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC10.64□□□□□ -0.71
SMARCA4P51532 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA4P51532 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA4P51532 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 AP002370.1-201ENST00000528055 1602 ntBASIC10.64□□□□□ -0.71
SMARCA4P51532 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA4P51532 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC10.64□□□□□ -0.71
SMARCA4P51532 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC10.64□□□□□ -0.71
SMARCA4P51532 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA4P51532 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SMARCA4P51532 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA4P51532 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SMARCA4P51532 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA4P51532 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA4P51532 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC10.63□□□□□ -0.71
SMARCA4P51532 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC10.63□□□□□ -0.71
SMARCA4P51532 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC10.63□□□□□ -0.71
SMARCA4P51532 BX284632.1-201ENST00000478218 541 ntBASIC10.63□□□□□ -0.71
SMARCA4P51532 RPL32P33-201ENST00000487023 394 ntBASIC10.63□□□□□ -0.71
SMARCA4P51532 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC10.63□□□□□ -0.71
SMARCA4P51532 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC10.63□□□□□ -0.71
SMARCA4P51532 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA4P51532 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA4P51532 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC10.63□□□□□ -0.71
SMARCA4P51532 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SMARCA4P51532 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SMARCA4P51532 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA4P51532 MRE11P1-201ENST00000464884 2127 ntBASIC10.63□□□□□ -0.71
SMARCA4P51532 AC114786.1-201ENST00000512892 1415 ntBASIC10.63□□□□□ -0.71
SMARCA4P51532 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA4P51532 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC10.63□□□□□ -0.71
SMARCA4P51532 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA4P51532 AC110597.1-201ENST00000562669 3176 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 EIF4A1P7-201ENST00000421800 1220 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SMARCA4P51532 AL663074.2-201ENST00000440621 479 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 AC245047.2-201ENST00000441060 530 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SMARCA4P51532 RN7SL172P-201ENST00000460535 303 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC10.62□□□□□ -0.71
SMARCA4P51532 ASB8-202ENST00000535055 657 ntTSL 2 BASIC10.62□□□□□ -0.71
SMARCA4P51532 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
SMARCA4P51532 AL049872.1-201ENST00000556323 322 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC10.62□□□□□ -0.71
SMARCA4P51532 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC10.62□□□□□ -0.71
SMARCA4P51532 AC145423.1-201ENST00000605712 336 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC10.62□□□□□ -0.71
SMARCA4P51532 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC10.62□□□□□ -0.71
SMARCA4P51532 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC10.62□□□□□ -0.71
SMARCA4P51532 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC10.62□□□□□ -0.71
SMARCA4P51532 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SMARCA4P51532 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SMARCA4P51532 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SMARCA4P51532 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
SMARCA4P51532 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
SMARCA4P51532 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC10.62□□□□□ -0.71
SMARCA4P51532 AC008937.3-201ENST00000606813 1700 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 AC087516.1-201ENST00000561236 2428 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SMARCA4P51532 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms