Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 HSPD1P8-201ENST00000400121 1658 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
HOXD13P35453 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 AC009135.2-201ENST00000624136 1768 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
HOXD13P35453 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD13P35453 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD13P35453 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD13P35453 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD13P35453 SNORA70H-201ENST00000383910 135 ntBASIC6.79□□□□□ -1.32
HOXD13P35453 SNORA70J-201ENST00000384182 135 ntBASIC6.79□□□□□ -1.32
HOXD13P35453 YWHAZP6-201ENST00000399764 738 ntBASIC6.79□□□□□ -1.32
HOXD13P35453 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXD13P35453 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.79□□□□□ -1.32
HOXD13P35453 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 AC099782.1-201ENST00000425889 474 ntBASIC6.79□□□□□ -1.32
HOXD13P35453 BX119904.3-201ENST00000428194 957 ntBASIC6.79□□□□□ -1.32
HOXD13P35453 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HOXD13P35453 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.79□□□□□ -1.32
HOXD13P35453 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXD13P35453 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.79□□□□□ -1.32
HOXD13P35453 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 DEFB109A-201ENST00000482450 265 ntBASIC6.79□□□□□ -1.32
HOXD13P35453 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.79□□□□□ -1.32
HOXD13P35453 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXD13P35453 RNA5SP400-201ENST00000517155 111 ntBASIC6.79□□□□□ -1.32
HOXD13P35453 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXD13P35453 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXD13P35453 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.79□□□□□ -1.32
HOXD13P35453 GLYATL1P2-202ENST00000588046 902 ntBASIC6.79□□□□□ -1.32
HOXD13P35453 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.79□□□□□ -1.32
HOXD13P35453 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXD13P35453 AC002044.3-201ENST00000623314 541 ntBASIC6.79□□□□□ -1.32
HOXD13P35453 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD13P35453 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD13P35453 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD13P35453 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD13P35453 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD13P35453 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD13P35453 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD13P35453 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD13P35453 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD13P35453 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXD13P35453 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD13P35453 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD13P35453 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD13P35453 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD13P35453 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HOXD13P35453 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HOXD13P35453 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD13P35453 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
HOXD13P35453 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
HOXD13P35453 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HOXD13P35453 RNA5SP279-201ENST00000365513 117 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXD13P35453 RNA5SP251-201ENST00000410614 137 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 RNU4-64P-201ENST00000410795 131 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXD13P35453 RPSAP65-201ENST00000429660 595 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXD13P35453 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXD13P35453 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXD13P35453 OR52Y1P-201ENST00000452418 828 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 AC112187.1-201ENST00000455837 479 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXD13P35453 OR7E22P-201ENST00000478335 1035 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 AL117692.1-201ENST00000494283 713 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXD13P35453 SNX18P25-201ENST00000510539 758 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 RNU6-943P-201ENST00000516960 98 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 OR4A41P-201ENST00000533053 928 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD13P35453 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXD13P35453 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXD13P35453 AC121758.1-202ENST00000556917 658 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HOXD13P35453 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.78□□□□□ -1.32
HOXD13P35453 AL078601.3-201ENST00000573303 535 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 AC048341.3-201ENST00000619323 491 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 AC116667.2-201ENST00000641075 823 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 AC119674.1-202ENST00000641333 1860 ntBASIC6.78□□□□□ -1.32
HOXD13P35453 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXD13P35453 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms