Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL360013.1-201ENST00000419031 858 ntBASIC6.22□□□□□ -1.41
RPA3P35244 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.22□□□□□ -1.41
RPA3P35244 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.22□□□□□ -1.41
RPA3P35244 GTF3AP6-201ENST00000432585 986 ntBASIC6.22□□□□□ -1.41
RPA3P35244 AL731534.1-201ENST00000434711 269 ntBASIC6.22□□□□□ -1.41
RPA3P35244 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.22□□□□□ -1.41
RPA3P35244 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.22□□□□□ -1.41
RPA3P35244 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.22□□□□□ -1.41
RPA3P35244 KF459542.1-201ENST00000450908 553 ntBASIC6.22□□□□□ -1.41
RPA3P35244 AC073476.1-201ENST00000452854 407 ntBASIC6.22□□□□□ -1.41
RPA3P35244 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RPA3P35244 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.22□□□□□ -1.41
RPA3P35244 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.22□□□□□ -1.41
RPA3P35244 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RPA3P35244 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.22□□□□□ -1.41
RPA3P35244 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.22□□□□□ -1.41
RPA3P35244 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.22□□□□□ -1.41
RPA3P35244 AC073046.2-201ENST00000604756 527 ntBASIC6.22□□□□□ -1.41
RPA3P35244 HTR1DP1-201ENST00000616500 888 ntBASIC6.22□□□□□ -1.41
RPA3P35244 AC089999.3-201ENST00000622440 577 ntBASIC6.22□□□□□ -1.41
RPA3P35244 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RPA3P35244 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RPA3P35244 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RPA3P35244 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.22□□□□□ -1.41
RPA3P35244 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RPA3P35244 SSXP3-201ENST00000442971 1300 ntBASIC6.22□□□□□ -1.41
RPA3P35244 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.22□□□□□ -1.41
RPA3P35244 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RPA3P35244 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.22□□□□□ -1.41
RPA3P35244 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RPA3P35244 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.21□□□□□ -1.41
RPA3P35244 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.21□□□□□ -1.41
RPA3P35244 AC097634.1-201ENST00000604491 2467 ntBASIC6.21□□□□□ -1.41
RPA3P35244 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.21□□□□□ -1.41
RPA3P35244 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.21□□□□□ -1.41
RPA3P35244 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RPA3P35244 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.21□□□□□ -1.42
RPA3P35244 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.21□□□□□ -1.42
RPA3P35244 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.21□□□□□ -1.42
RPA3P35244 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RPA3P35244 RPL7P58-201ENST00000402913 758 ntBASIC6.21□□□□□ -1.42
RPA3P35244 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.21□□□□□ -1.42
RPA3P35244 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.21□□□□□ -1.42
RPA3P35244 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.21□□□□□ -1.42
RPA3P35244 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.21□□□□□ -1.42
RPA3P35244 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.21□□□□□ -1.42
RPA3P35244 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.21□□□□□ -1.42
RPA3P35244 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.21□□□□□ -1.42
RPA3P35244 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.21□□□□□ -1.42
RPA3P35244 RN7SL39P-201ENST00000462264 297 ntBASIC6.21□□□□□ -1.42
RPA3P35244 RPS7P10-201ENST00000464254 603 ntBASIC6.21□□□□□ -1.42
RPA3P35244 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.21□□□□□ -1.42
RPA3P35244 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
RPA3P35244 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RPA3P35244 AL133399.1-201ENST00000527476 298 ntBASIC6.21□□□□□ -1.42
RPA3P35244 AC135983.3-201ENST00000528049 1226 ntBASIC6.21□□□□□ -1.42
RPA3P35244 OR6M2P-201ENST00000529831 871 ntBASIC6.21□□□□□ -1.42
RPA3P35244 RPL41P2-201ENST00000544920 409 ntBASIC6.21□□□□□ -1.42
RPA3P35244 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.21□□□□□ -1.42
RPA3P35244 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RPA3P35244 NPM1P42-201ENST00000560329 862 ntBASIC6.21□□□□□ -1.42
RPA3P35244 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.21□□□□□ -1.42
RPA3P35244 ARGFXP2-201ENST00000579304 949 ntBASIC6.21□□□□□ -1.42
RPA3P35244 AC020916.2-201ENST00000591242 360 ntBASIC6.21□□□□□ -1.42
RPA3P35244 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.21□□□□□ -1.42
RPA3P35244 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.21□□□□□ -1.42
RPA3P35244 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
RPA3P35244 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RPA3P35244 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RPA3P35244 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.21□□□□□ -1.42
RPA3P35244 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RPA3P35244 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.21□□□□□ -1.42
RPA3P35244 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.2□□□□□ -1.42
RPA3P35244 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.2□□□□□ -1.42
RPA3P35244 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPA3P35244 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPA3P35244 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RPA3P35244 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPA3P35244 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RPA3P35244 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RPA3P35244 SNORD1C-201ENST00000363315 78 ntBASIC6.2□□□□□ -1.42
RPA3P35244 YWHAZP4-201ENST00000392459 708 ntBASIC6.2□□□□□ -1.42
RPA3P35244 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.2□□□□□ -1.42
RPA3P35244 AL133260.1-201ENST00000405720 405 ntBASIC6.2□□□□□ -1.42
RPA3P35244 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.2□□□□□ -1.42
RPA3P35244 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.2□□□□□ -1.42
RPA3P35244 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.2□□□□□ -1.42
RPA3P35244 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.2□□□□□ -1.42
RPA3P35244 IGLV3-4-201ENST00000432300 244 ntBASIC6.2□□□□□ -1.42
RPA3P35244 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RPA3P35244 AC016908.1-201ENST00000442571 1219 ntBASIC6.2□□□□□ -1.42
RPA3P35244 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RPA3P35244 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.2□□□□□ -1.42
RPA3P35244 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.2□□□□□ -1.42
RPA3P35244 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RPA3P35244 AC044810.1-201ENST00000480271 711 ntBASIC6.2□□□□□ -1.42
RPA3P35244 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.2□□□□□ -1.42
RPA3P35244 AC010343.2-201ENST00000510162 224 ntBASIC6.2□□□□□ -1.42
RPA3P35244 RNA5SP418-201ENST00000515951 117 ntBASIC6.2□□□□□ -1.42
RPA3P35244 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms