Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RPL29P23-201ENST00000486188 442 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC105420.1-201ENST00000504389 582 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AL589863.1-201ENST00000595383 631 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 RNU6-84P-201ENST00000607737 102 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 MIR6889-201ENST00000613185 59 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC022726.2-201ENST00000634673 547 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 OR7E91P-202ENST00000642062 1198 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AL513548.1-201ENST00000562904 1724 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 SNORA70H-201ENST00000383910 135 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 SNORA70J-201ENST00000384182 135 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC003045.1-201ENST00000398779 713 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AL589994.1-201ENST00000404962 340 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 MORF4-201ENST00000447135 971 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 MTND6P5-201ENST00000448266 512 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 RN7SL326P-201ENST00000477493 296 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 RPL12P31-201ENST00000478433 450 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 KHDC1P1-201ENST00000511053 508 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC253576.1-201ENST00000511645 1156 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 SNORA74.1-201ENST00000516320 180 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 RNA5SP400-201ENST00000517155 111 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC022616.2-201ENST00000523185 300 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC244034.2-201ENST00000562504 509 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC234775.3-201ENST00000564612 656 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AL583832.1-201ENST00000603227 784 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC006924.1-201ENST00000610750 559 ntBASIC6.36□□□□□ -1.39
HLA-DPA1P20036 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DPA1P20036 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DPA1P20036 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HLA-DPA1P20036 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DPA1P20036 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DPA1P20036 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.35□□□□□ -1.39
HLA-DPA1P20036 AC140479.2-201ENST00000421567 3130 ntBASIC6.35□□□□□ -1.39
HLA-DPA1P20036 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DPA1P20036 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DPA1P20036 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DPA1P20036 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
HLA-DPA1P20036 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
HLA-DPA1P20036 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms