Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.85□□□□□ -1.31
COL6A2P12110 AC061975.3-201ENST00000583209 244 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.85□□□□□ -1.31
COL6A2P12110 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.85□□□□□ -1.31
COL6A2P12110 AC025588.2-201ENST00000604851 466 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.85□□□□□ -1.31
COL6A2P12110 AC087893.2-201ENST00000623272 255 ntBASIC6.85□□□□□ -1.31
COL6A2P12110 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.85□□□□□ -1.31
COL6A2P12110 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.85□□□□□ -1.31
COL6A2P12110 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
COL6A2P12110 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.85□□□□□ -1.31
COL6A2P12110 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
COL6A2P12110 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
COL6A2P12110 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.85□□□□□ -1.31
COL6A2P12110 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.85□□□□□ -1.31
COL6A2P12110 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL6A2P12110 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 AC099786.3-201ENST00000565735 1410 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
COL6A2P12110 CCDC150P1-201ENST00000537123 2215 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.84□□□□□ -1.31
COL6A2P12110 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 RNFT1P3-201ENST00000340898 1052 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.84□□□□□ -1.31
COL6A2P12110 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
COL6A2P12110 RN7SKP97-201ENST00000410966 333 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.84□□□□□ -1.31
COL6A2P12110 BX119904.4-201ENST00000424402 301 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.84□□□□□ -1.31
COL6A2P12110 BX119321.1-201ENST00000428912 797 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.84□□□□□ -1.31
COL6A2P12110 UBE2V1P1-201ENST00000430836 445 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 VN1R108P-201ENST00000431580 830 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.84□□□□□ -1.31
COL6A2P12110 CHCHD4P5-201ENST00000436684 427 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 PHBP4-201ENST00000437447 837 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 MTCYBP21-201ENST00000443300 1113 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.84□□□□□ -1.31
COL6A2P12110 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.84□□□□□ -1.31
COL6A2P12110 AC016489.1-201ENST00000461109 375 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.84□□□□□ -1.31
COL6A2P12110 PRDX3P4-201ENST00000470828 747 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 MYL6P4-201ENST00000477911 453 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.84□□□□□ -1.31
COL6A2P12110 RN7SL282P-201ENST00000479676 297 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 RPL21P47-201ENST00000483696 477 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 RN7SL445P-201ENST00000495609 293 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.84□□□□□ -1.31
COL6A2P12110 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC6.84□□□□□ -1.31
COL6A2P12110 HPRT1P1-201ENST00000509498 657 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.84□□□□□ -1.31
COL6A2P12110 RNA5SP518-201ENST00000515957 119 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 MRPS36P3-201ENST00000519284 130 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.84□□□□□ -1.31
COL6A2P12110 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.84□□□□□ -1.31
COL6A2P12110 IGLVV-66-201ENST00000523818 341 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 GTF2IP11-201ENST00000526931 420 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.84□□□□□ -1.31
COL6A2P12110 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.84□□□□□ -1.31
COL6A2P12110 PSMC1P8-201ENST00000536820 1296 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.84□□□□□ -1.31
COL6A2P12110 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.84□□□□□ -1.31
COL6A2P12110 AL135978.1-201ENST00000553618 1266 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AL442163.2-201ENST00000553912 710 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
COL6A2P12110 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.84□□□□□ -1.31
COL6A2P12110 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.84□□□□□ -1.31
COL6A2P12110 AC006116.6-201ENST00000593258 1103 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.84□□□□□ -1.31
COL6A2P12110 AC068790.2-201ENST00000602601 557 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AC021171.1-201ENST00000603137 706 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AC073387.2-201ENST00000604797 784 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AL352984.2-201ENST00000611153 546 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 AC009090.3-201ENST00000616553 565 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 AL121594.5-201ENST00000631724 573 ntBASIC6.84□□□□□ -1.31
COL6A2P12110 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
COL6A2P12110 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.84□□□□□ -1.31
COL6A2P12110 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.84□□□□□ -1.31
COL6A2P12110 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.84□□□□□ -1.31
COL6A2P12110 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.84□□□□□ -1.31
COL6A2P12110 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
COL6A2P12110 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms