Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC092106.2-201ENST00000436597 487 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.25□□□□□ -1.41
PCNAP12004 HMGN1P32-201ENST00000441744 256 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AL355355.1-201ENST00000442900 793 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.25□□□□□ -1.41
PCNAP12004 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.25□□□□□ -1.41
PCNAP12004 CCNJP1-201ENST00000450600 1149 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.25□□□□□ -1.41
PCNAP12004 RN7SL267P-201ENST00000485107 261 ntBASIC6.25□□□□□ -1.41
PCNAP12004 RPL5P33-201ENST00000487833 905 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AC018639.1-201ENST00000492994 442 ntBASIC6.25□□□□□ -1.41
PCNAP12004 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 AC131392.1-201ENST00000506490 633 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.25□□□□□ -1.41
PCNAP12004 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.25□□□□□ -1.41
PCNAP12004 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.25□□□□□ -1.41
PCNAP12004 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.25□□□□□ -1.41
PCNAP12004 SCARNA5-201ENST00000516201 276 ntBASIC6.25□□□□□ -1.41
PCNAP12004 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.25□□□□□ -1.41
PCNAP12004 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.25□□□□□ -1.41
PCNAP12004 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCNAP12004 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.25□□□□□ -1.41
PCNAP12004 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.25□□□□□ -1.41
PCNAP12004 AL023583.1-201ENST00000607518 1143 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 AC116165.3-201ENST00000614524 400 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AL139254.3-201ENST00000641097 674 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCNAP12004 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 AP005432.1-201ENST00000580891 3485 ntBASIC6.25□□□□□ -1.41
PCNAP12004 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCNAP12004 AC068769.1-201ENST00000474767 2426 ntBASIC6.25□□□□□ -1.41
PCNAP12004 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCNAP12004 NEK2P2-201ENST00000438441 1338 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AC022417.1-201ENST00000624768 1303 ntBASIC6.25□□□□□ -1.41
PCNAP12004 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCNAP12004 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCNAP12004 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCNAP12004 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.24□□□□□ -1.41
PCNAP12004 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
PCNAP12004 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
PCNAP12004 SMG1P5-202ENST00000529428 4219 ntBASIC6.24□□□□□ -1.41
PCNAP12004 SMG1P2-201ENST00000566127 4221 ntBASIC6.24□□□□□ -1.41
PCNAP12004 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.24□□□□□ -1.41
PCNAP12004 RN7SKP186-201ENST00000365371 303 ntBASIC6.24□□□□□ -1.41
PCNAP12004 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.24□□□□□ -1.41
PCNAP12004 SNORA70H-201ENST00000383910 135 ntBASIC6.24□□□□□ -1.41
PCNAP12004 SNORA70J-201ENST00000384182 135 ntBASIC6.24□□□□□ -1.41
PCNAP12004 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.24□□□□□ -1.41
PCNAP12004 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCNAP12004 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCNAP12004 VN1R38P-201ENST00000450265 887 ntBASIC6.24□□□□□ -1.41
PCNAP12004 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.24□□□□□ -1.41
PCNAP12004 AL049829.1-201ENST00000465411 156 ntBASIC6.24□□□□□ -1.41
PCNAP12004 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.24□□□□□ -1.41
PCNAP12004 MINOS1P4-201ENST00000515470 318 ntBASIC6.24□□□□□ -1.41
PCNAP12004 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.24□□□□□ -1.41
PCNAP12004 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.24□□□□□ -1.41
PCNAP12004 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.24□□□□□ -1.41
PCNAP12004 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.24□□□□□ -1.41
PCNAP12004 AC092718.4-201ENST00000566639 716 ntBASIC6.24□□□□□ -1.41
PCNAP12004 AC004232.2-201ENST00000574245 821 ntBASIC6.24□□□□□ -1.41
PCNAP12004 AC133552.4-201ENST00000576103 676 ntBASIC6.24□□□□□ -1.41
PCNAP12004 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.24□□□□□ -1.41
PCNAP12004 AC074141.1-201ENST00000588129 2995 ntBASIC6.24□□□□□ -1.41
PCNAP12004 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.24□□□□□ -1.41
PCNAP12004 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.24□□□□□ -1.41
PCNAP12004 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.24□□□□□ -1.41
PCNAP12004 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.24□□□□□ -1.41
PCNAP12004 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.24□□□□□ -1.41
PCNAP12004 TCL6_3.1-201ENST00000619064 137 ntBASIC6.24□□□□□ -1.41
PCNAP12004 AC091059.2-201ENST00000623355 614 ntBASIC6.24□□□□□ -1.41
PCNAP12004 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.24□□□□□ -1.41
PCNAP12004 AC007842.1-201ENST00000597336 2039 ntBASIC6.24□□□□□ -1.41
PCNAP12004 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PCNAP12004 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
PCNAP12004 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.24□□□□□ -1.41
PCNAP12004 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCNAP12004 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCNAP12004 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCNAP12004 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCNAP12004 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.24□□□□□ -1.41
PCNAP12004 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.24□□□□□ -1.41
PCNAP12004 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.24□□□□□ -1.41
PCNAP12004 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCNAP12004 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCNAP12004 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.23□□□□□ -1.41
PCNAP12004 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms