Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC018717.1-201ENST00000457712 1505 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 AP002370.1-201ENST00000528055 1602 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 RNU1-49P-201ENST00000363468 159 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 RNA5SP478-201ENST00000364657 115 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 RNA5SP122-201ENST00000384457 108 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 MIR130B-202ENST00000385018 82 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 AC073310.1-201ENST00000423226 1033 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 AC023141.3-201ENST00000436698 278 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 ATP5LP2-201ENST00000440646 311 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 AL500527.1-201ENST00000448532 255 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 AC002553.3-201ENST00000453002 341 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 AP000926.3-201ENST00000497201 299 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 AL158068.1-201ENST00000506116 616 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 UGT2A3P7-201ENST00000510485 734 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 AC108865.2-201ENST00000606881 432 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 AC024884.1-201ENST00000620583 399 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 AL354854.1-201ENST00000455940 1363 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 MTCO1P28-201ENST00000574177 1528 ntBASIC7.42□□□□□ -1.22
HLA-DOAP06340 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-DOAP06340 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
HLA-DOAP06340 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 SNORA21-201ENST00000362423 132 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 AL353662.1-201ENST00000439099 327 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 VN1R96P-201ENST00000446052 858 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 RANP2-201ENST00000456833 229 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 SNX18P26-201ENST00000458433 740 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 RPL5P16-201ENST00000471467 790 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 RPL37AP8-201ENST00000494116 276 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 RNU6-467P-201ENST00000517027 110 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 TRIM77BP-201ENST00000524985 1119 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 AP001858.2-201ENST00000536213 601 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 AC079905.1-201ENST00000549280 475 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 EIF1AXP2-201ENST00000555940 413 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 AC090330.1-201ENST00000588646 764 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 BX322635.1-201ENST00000605804 496 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
HLA-DOAP06340 AC129778.1-202ENST00000623812 261 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 AL591379.1-207ENST00000635982 261 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-DOAP06340 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.41□□□□□ -1.22
HLA-DOAP06340 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms