Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 NATP-201ENST00000523491 878 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AP001803.1-201ENST00000525668 147 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 NPIPB1P-202ENST00000588786 828 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AC010487.1-201ENST00000594408 1172 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AC092960.1-201ENST00000604762 351 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AL512413.1-201ENST00000606489 382 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AC138965.3-201ENST00000623875 498 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AC073263.3-201ENST00000624449 858 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 SAGE3P-201ENST00000619800 1635 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC008079.2-201ENST00000623543 20396 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 MIR187-201ENST00000385062 109 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 PDCL3P5-201ENST00000398028 722 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 RN7SKP137-201ENST00000411074 307 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC079809.1-201ENST00000415468 276 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 RPS10P21-201ENST00000430654 475 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 PUDPP2-201ENST00000431423 643 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AL162739.1-201ENST00000450606 307 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 RPL26P30-201ENST00000453533 435 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 RPL12P24-201ENST00000474907 486 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 PDCL3P4-201ENST00000489621 720 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 SCG5-207ENST00000497208 949 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 MORF4L2P1-201ENST00000503761 858 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 TOMM22P4-201ENST00000511318 336 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 RNU6-964P-201ENST00000516524 69 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 IGKV2D-38-201ENST00000518423 240 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AP004609.2-201ENST00000532177 190 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC084824.2-201ENST00000548906 345 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC126323.4-201ENST00000566935 234 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 RN7SL208P-201ENST00000577964 296 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 FXYD6P1-201ENST00000604857 285 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 OR51C1P-201ENST00000608504 942 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC096708.4-201ENST00000620563 552 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC008626.2-201ENST00000624425 248 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 GLYATL1P1-201ENST00000528297 1607 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC011416.1-201ENST00000514947 1732 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQA1P01909 AC140479.2-201ENST00000421567 3130 ntBASIC4.63□□□□□ -1.67
HLA-DQA1P01909 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 AC002525.1-201ENST00000624392 1622 ntBASIC4.62□□□□□ -1.67
HLA-DQA1P01909 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HLA-DQA1P01909 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms