Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.2□□□□□ -1.42
LDLRP01130 AL845552.1-201ENST00000556820 323 ntBASIC6.2□□□□□ -1.42
LDLRP01130 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.2□□□□□ -1.42
LDLRP01130 AC024589.2-201ENST00000605642 1294 ntBASIC6.2□□□□□ -1.42
LDLRP01130 MIR6721-201ENST00000617181 87 ntBASIC6.2□□□□□ -1.42
LDLRP01130 AC025262.3-201ENST00000623666 360 ntBASIC6.2□□□□□ -1.42
LDLRP01130 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.2□□□□□ -1.42
LDLRP01130 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LDLRP01130 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 AL161901.1-201ENST00000624954 3425 ntBASIC6.2□□□□□ -1.42
LDLRP01130 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
LDLRP01130 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.2□□□□□ -1.42
LDLRP01130 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.2□□□□□ -1.42
LDLRP01130 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LDLRP01130 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.19□□□□□ -1.42
LDLRP01130 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.19□□□□□ -1.42
LDLRP01130 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LDLRP01130 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
LDLRP01130 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LDLRP01130 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
LDLRP01130 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LDLRP01130 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.19□□□□□ -1.42
LDLRP01130 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LDLRP01130 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.19□□□□□ -1.42
LDLRP01130 RNU1-55P-201ENST00000365510 158 ntBASIC6.19□□□□□ -1.42
LDLRP01130 RNA5SP279-201ENST00000365513 117 ntBASIC6.19□□□□□ -1.42
LDLRP01130 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.19□□□□□ -1.42
LDLRP01130 OR2W4P-201ENST00000406496 926 ntBASIC6.19□□□□□ -1.42
LDLRP01130 SNORA81-201ENST00000408493 178 ntBASIC6.19□□□□□ -1.42
LDLRP01130 RN7SKP161-201ENST00000411110 305 ntBASIC6.19□□□□□ -1.42
LDLRP01130 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.19□□□□□ -1.42
LDLRP01130 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.19□□□□□ -1.42
LDLRP01130 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.19□□□□□ -1.42
LDLRP01130 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.19□□□□□ -1.42
LDLRP01130 HSD3BP3-201ENST00000514706 994 ntBASIC6.19□□□□□ -1.42
LDLRP01130 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.19□□□□□ -1.42
LDLRP01130 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.19□□□□□ -1.42
LDLRP01130 OOSP1P2-201ENST00000579644 351 ntBASIC6.19□□□□□ -1.42
LDLRP01130 RPL29P33-201ENST00000587474 316 ntBASIC6.19□□□□□ -1.42
LDLRP01130 AC012175.1-201ENST00000603755 531 ntBASIC6.19□□□□□ -1.42
LDLRP01130 AL157899.1-201ENST00000604110 936 ntBASIC6.19□□□□□ -1.42
LDLRP01130 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.19□□□□□ -1.42
LDLRP01130 AC022960.2-201ENST00000616300 666 ntBASIC6.19□□□□□ -1.42
LDLRP01130 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.19□□□□□ -1.42
LDLRP01130 AC017037.4-201ENST00000624526 826 ntBASIC6.19□□□□□ -1.42
LDLRP01130 AP003400.6-201ENST00000624698 740 ntBASIC6.19□□□□□ -1.42
LDLRP01130 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LDLRP01130 AC010325.3-201ENST00000641084 394 ntBASIC6.19□□□□□ -1.42
LDLRP01130 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LDLRP01130 AC011815.2-201ENST00000618230 2021 ntBASIC6.19□□□□□ -1.42
LDLRP01130 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.19□□□□□ -1.42
LDLRP01130 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LDLRP01130 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LDLRP01130 DLEU2L-201ENST00000371086 3555 ntBASIC6.19□□□□□ -1.42
LDLRP01130 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.19□□□□□ -1.42
LDLRP01130 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
LDLRP01130 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LDLRP01130 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
LDLRP01130 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LDLRP01130 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.19□□□□□ -1.42
LDLRP01130 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.18□□□□□ -1.42
LDLRP01130 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
LDLRP01130 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LDLRP01130 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.18□□□□□ -1.42
LDLRP01130 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LDLRP01130 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LDLRP01130 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.18□□□□□ -1.42
LDLRP01130 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.18□□□□□ -1.42
LDLRP01130 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LDLRP01130 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.18□□□□□ -1.42
LDLRP01130 NPM1P38-201ENST00000403835 865 ntBASIC6.18□□□□□ -1.42
LDLRP01130 HMGA1P8-201ENST00000414130 321 ntBASIC6.18□□□□□ -1.42
LDLRP01130 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.18□□□□□ -1.42
LDLRP01130 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.18□□□□□ -1.42
LDLRP01130 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.18□□□□□ -1.42
LDLRP01130 AC009237.1-201ENST00000442127 744 ntBASIC6.18□□□□□ -1.42
LDLRP01130 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.18□□□□□ -1.42
LDLRP01130 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.18□□□□□ -1.42
LDLRP01130 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.18□□□□□ -1.42
LDLRP01130 AC094085.1-201ENST00000468914 584 ntBASIC6.18□□□□□ -1.42
LDLRP01130 RN7SL214P-201ENST00000487317 265 ntBASIC6.18□□□□□ -1.42
LDLRP01130 RN7SL362P-201ENST00000494228 267 ntBASIC6.18□□□□□ -1.42
LDLRP01130 AC091874.2-201ENST00000505889 720 ntBASIC6.18□□□□□ -1.42
LDLRP01130 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.18□□□□□ -1.42
LDLRP01130 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.18□□□□□ -1.42
LDLRP01130 IGKV3D-34-201ENST00000522638 302 ntBASIC6.18□□□□□ -1.42
LDLRP01130 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.18□□□□□ -1.42
LDLRP01130 AC007494.1-201ENST00000562293 760 ntBASIC6.18□□□□□ -1.42
LDLRP01130 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.18□□□□□ -1.42
LDLRP01130 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.18□□□□□ -1.42
LDLRP01130 AL352984.2-202ENST00000613699 155 ntBASIC6.18□□□□□ -1.42
LDLRP01130 AL138960.1-201ENST00000613838 513 ntBASIC6.18□□□□□ -1.42
LDLRP01130 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.18□□□□□ -1.42
LDLRP01130 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms