Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 DLEU2L-201ENST00000371086 3555 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 AC027279.4-201ENST00000624371 2072 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 AC125238.2-201ENST00000430003 1440 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
CLPTM1O96005 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CLPTM1O96005 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CLPTM1O96005 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CLPTM1O96005 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.92□□□□□ -1.46
CLPTM1O96005 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CLPTM1O96005 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.92□□□□□ -1.46
CLPTM1O96005 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CLPTM1O96005 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.92□□□□□ -1.46
CLPTM1O96005 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.92□□□□□ -1.46
CLPTM1O96005 UBE2V1P14-201ENST00000415815 558 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 RFESDP1-201ENST00000422350 461 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 BX276092.6-201ENST00000430476 250 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.92□□□□□ -1.46
CLPTM1O96005 AC092106.2-201ENST00000436597 487 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 KRT8P51-201ENST00000438938 274 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 BX276092.8-201ENST00000455722 250 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 RN7SL492P-201ENST00000460700 295 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 RPS26P6-201ENST00000475156 348 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.92□□□□□ -1.46
CLPTM1O96005 ST13P12-201ENST00000508958 1094 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 LDHAP1-201ENST00000509421 992 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.92□□□□□ -1.46
CLPTM1O96005 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.92□□□□□ -1.46
CLPTM1O96005 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.92□□□□□ -1.46
CLPTM1O96005 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.92□□□□□ -1.46
CLPTM1O96005 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.92□□□□□ -1.46
CLPTM1O96005 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.92□□□□□ -1.46
CLPTM1O96005 AC010287.1-201ENST00000566916 357 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 RN7SL32P-201ENST00000580514 281 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.92□□□□□ -1.46
CLPTM1O96005 AC002069.2-201ENST00000603580 883 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 AL591222.2-201ENST00000604443 754 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 AC114546.4-201ENST00000624413 369 ntBASIC5.92□□□□□ -1.46
CLPTM1O96005 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.92□□□□□ -1.46
CLPTM1O96005 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.92□□□□□ -1.46
CLPTM1O96005 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
CLPTM1O96005 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CLPTM1O96005 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CLPTM1O96005 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CLPTM1O96005 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLPTM1O96005 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.92□□□□□ -1.46
CLPTM1O96005 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.91□□□□□ -1.46
CLPTM1O96005 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 OR10D1P-201ENST00000355343 936 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 RNA5SP478-201ENST00000364657 115 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.91□□□□□ -1.46
CLPTM1O96005 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.91□□□□□ -1.46
CLPTM1O96005 BX119904.3-201ENST00000428194 957 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.91□□□□□ -1.46
CLPTM1O96005 USP24P1-201ENST00000433802 779 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.91□□□□□ -1.46
CLPTM1O96005 AL845321.1-201ENST00000444603 348 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 AL354714.5-201ENST00000450131 590 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 GOT2P2-201ENST00000450663 1251 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 NMNAT1P3-201ENST00000457517 888 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.91□□□□□ -1.46
CLPTM1O96005 RN7SL390P-201ENST00000470634 284 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 UOX-201ENST00000471089 899 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.91□□□□□ -1.46
CLPTM1O96005 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1O96005 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.91□□□□□ -1.46
CLPTM1O96005 IGKV2D-38-201ENST00000518423 240 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.91□□□□□ -1.46
CLPTM1O96005 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.91□□□□□ -1.46
CLPTM1O96005 MIR4312-201ENST00000579909 76 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLPTM1O96005 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1O96005 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.91□□□□□ -1.46
CLPTM1O96005 MRPL57P3-201ENST00000619218 176 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 AP001264.1-201ENST00000620602 703 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 AC069542.2-201ENST00000624816 216 ntBASIC5.91□□□□□ -1.46
CLPTM1O96005 CFTRP2-201ENST00000634304 199 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms