Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 ZNF101P1-201ENST00000435701 1720 ntBASIC5.83□□□□□ -1.48
SSX4O60224 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
SSX4O60224 AC011815.2-201ENST00000618230 2021 ntBASIC5.83□□□□□ -1.48
SSX4O60224 AC010894.1-201ENST00000313760 361 ntBASIC5.83□□□□□ -1.48
SSX4O60224 RN7SKP171-201ENST00000364417 303 ntBASIC5.83□□□□□ -1.48
SSX4O60224 RNU1-59P-201ENST00000364829 162 ntBASIC5.83□□□□□ -1.48
SSX4O60224 SNORA64.3-201ENST00000365647 134 ntBASIC5.83□□□□□ -1.48
SSX4O60224 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX4O60224 AL139184.1-202ENST00000422303 222 ntBASIC5.83□□□□□ -1.48
SSX4O60224 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SSX4O60224 VN1R53P-201ENST00000429536 957 ntBASIC5.83□□□□□ -1.48
SSX4O60224 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX4O60224 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SSX4O60224 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 AC234771.2-201ENST00000445718 597 ntBASIC5.83□□□□□ -1.48
SSX4O60224 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX4O60224 EEF1B2P3-201ENST00000447718 678 ntBASIC5.83□□□□□ -1.48
SSX4O60224 AL121578.2-201ENST00000448797 447 ntBASIC5.83□□□□□ -1.48
SSX4O60224 NDUFA5P8-201ENST00000449019 346 ntBASIC5.83□□□□□ -1.48
SSX4O60224 RN7SL379P-201ENST00000479912 293 ntBASIC5.83□□□□□ -1.48
SSX4O60224 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX4O60224 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.83□□□□□ -1.48
SSX4O60224 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.83□□□□□ -1.48
SSX4O60224 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX4O60224 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX4O60224 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX4O60224 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX4O60224 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 AC010547.7-201ENST00000570323 333 ntBASIC5.83□□□□□ -1.48
SSX4O60224 AC004232.1-201ENST00000571388 208 ntBASIC5.83□□□□□ -1.48
SSX4O60224 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX4O60224 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX4O60224 AC245128.3-201ENST00000594721 748 ntBASIC5.83□□□□□ -1.48
SSX4O60224 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX4O60224 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX4O60224 AC239803.2-201ENST00000610161 430 ntBASIC5.83□□□□□ -1.48
SSX4O60224 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.83□□□□□ -1.48
SSX4O60224 GAPDHP41-201ENST00000613707 975 ntBASIC5.83□□□□□ -1.48
SSX4O60224 MIR7109-201ENST00000613748 65 ntBASIC5.83□□□□□ -1.48
SSX4O60224 U1.25-201ENST00000614085 162 ntBASIC5.83□□□□□ -1.48
SSX4O60224 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.83□□□□□ -1.48
SSX4O60224 U1.34-201ENST00000618578 162 ntBASIC5.83□□□□□ -1.48
SSX4O60224 U1.31-201ENST00000620022 160 ntBASIC5.83□□□□□ -1.48
SSX4O60224 AC017037.4-201ENST00000624526 826 ntBASIC5.83□□□□□ -1.48
SSX4O60224 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX4O60224 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX4O60224 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 NCOA4P2-201ENST00000340589 1813 ntBASIC5.83□□□□□ -1.48
SSX4O60224 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX4O60224 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX4O60224 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX4O60224 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.82□□□□□ -1.48
SSX4O60224 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX4O60224 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SSX4O60224 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX4O60224 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 AL929601.4-201ENST00000613011 1341 ntBASIC5.82□□□□□ -1.48
SSX4O60224 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
SSX4O60224 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 SNORD8-201ENST00000363915 110 ntBASIC5.82□□□□□ -1.48
SSX4O60224 CXADRP1-201ENST00000398098 1095 ntBASIC5.82□□□□□ -1.48
SSX4O60224 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX4O60224 RPS17P17-201ENST00000419392 409 ntBASIC5.82□□□□□ -1.48
SSX4O60224 THEM7P-201ENST00000419556 672 ntBASIC5.82□□□□□ -1.48
SSX4O60224 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
SSX4O60224 AC006455.6-201ENST00000426192 893 ntBASIC5.82□□□□□ -1.48
SSX4O60224 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX4O60224 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.82□□□□□ -1.48
SSX4O60224 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX4O60224 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX4O60224 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX4O60224 snoU13.29-201ENST00000459370 104 ntBASIC5.82□□□□□ -1.48
SSX4O60224 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SSX4O60224 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms