Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 STAG3L4-201ENST00000352103 530 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AL050335.1-201ENST00000396909 869 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 GCNT1P4-201ENST00000404096 329 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AL023284.3-201ENST00000407767 334 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC002127.1-201ENST00000421305 225 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 KCTD9P1-201ENST00000430462 1167 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AP002884.1-201ENST00000479691 655 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC022206.1-201ENST00000495947 347 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC008055.1-201ENST00000547032 609 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 NDUFA5P11-201ENST00000567995 343 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC002310.3-201ENST00000569728 723 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC107993.1-201ENST00000591343 684 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 RPSAP75-201ENST00000605848 301 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 RN7SL261P-201ENST00000613441 282 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AL132640.3-201ENST00000630473 177 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 HCFC2P1-201ENST00000392864 1592 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 AC005618.1-201ENST00000606901 3148 ntBASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPIPA2E9PIF3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AC005332.9-201ENST00000620266 2921 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AL359694.2-201ENST00000567753 1615 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 RPL31P11-201ENST00000426558 1558 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 RNA5SP433-201ENST00000364491 114 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 RNU4-64P-201ENST00000410795 131 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 RPL21P50-201ENST00000417698 477 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 VN1R3-201ENST00000418822 919 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 GAPDHP75-201ENST00000433910 943 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 RPL12P11-201ENST00000439970 501 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 GTF2IP14-201ENST00000441415 586 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 CXCR2P1-202ENST00000443392 1074 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 HMGB1P7-201ENST00000450921 612 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AL358876.1-201ENST00000453364 1075 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 RN7SL254P-201ENST00000460609 284 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 HMGN1P17-201ENST00000513734 295 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 ZNF519P4-201ENST00000514008 125 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms