Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AC092651.1-201ENST00000426110 312 ntBASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AL445991.1-201ENST00000450381 475 ntBASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 RBMY2HP-201ENST00000457961 720 ntBASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 RN7SL104P-201ENST00000498686 293 ntBASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AC089999.3-201ENST00000622440 577 ntBASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AC018717.1-201ENST00000457712 1505 ntBASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 OR52B5P-204ENST00000641744 3467 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AC011416.1-201ENST00000514947 1732 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 PRELID1P1-201ENST00000403549 660 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 PTCD2P2-201ENST00000415579 1095 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AL512593.1-201ENST00000444758 779 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AC234771.2-201ENST00000445718 597 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AL162739.1-201ENST00000450606 307 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 RPS4XP17-201ENST00000479057 754 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 RPL34P33-201ENST00000486062 334 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 RN7SL66P-201ENST00000582099 264 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AC012368.3-201ENST00000604190 219 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AL136097.3-201ENST00000611097 505 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 AL122023.1-201ENST00000622847 530 ntBASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAV27A0A087WT01 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms