Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 RPL31P11-201ENST00000426558 1558 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AC104966.1-201ENST00000467010 1464 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AL035422.1-201ENST00000414193 397 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 RPL5P7-201ENST00000444235 813 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AL451063.1-201ENST00000450164 1133 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 Z83838.1-202ENST00000456225 839 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 RPL12P24-201ENST00000474907 486 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 IGHV1-14-201ENST00000523391 241 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AC091193.1-201ENST00000604640 448 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AP001264.1-201ENST00000620602 703 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AC012254.5-201ENST00000623573 478 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AC022400.9-201ENST00000623633 273 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AL132640.3-201ENST00000630473 177 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 AL731556.1-201ENST00000394628 3711 ntBASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AC005034.3-201ENST00000604845 1747 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 QRSL1P1-201ENST00000400977 1540 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 SNORA77.2-201ENST00000408571 112 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 RN7SKP281-201ENST00000410472 352 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 RPL36P18-201ENST00000419316 318 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AL354707.3-201ENST00000427308 331 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 MRPS21P3-201ENST00000436696 262 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 EMC3-AS1-205ENST00000438698 534 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AL645936.1-201ENST00000441979 518 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 VN1R38P-201ENST00000450265 887 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 RBMY2BP-202ENST00000451071 1156 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 SNX18P24-201ENST00000505249 671 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AC007066.2-202ENST00000566531 914 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 GLYATL1P2-202ENST00000588046 902 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AC137695.1-201ENST00000604126 489 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AC073488.6-201ENST00000632293 754 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 AKAP17BP-201ENST00000431706 2719 ntBASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.85□□□□□ -1.47
NPIPA1Q9UND3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms