Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC004890.3-201ENST00000605566 1095 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC089999.3-201ENST00000622440 577 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 RPL11P4-201ENST00000332269 436 ntBASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 SNORA64.3-201ENST00000365647 134 ntBASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AL133260.1-201ENST00000405720 405 ntBASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 RPL23AP60-201ENST00000450011 454 ntBASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 MTND6P8-201ENST00000503471 522 ntBASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 RNU2-45P-201ENST00000516068 187 ntBASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 AL122023.1-201ENST00000622847 530 ntBASIC5.9□□□□□ -1.46
VPS29Q9UBQ0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS29Q9UBQ0 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS29Q9UBQ0 AC114876.1-201ENST00000490962 1366 ntBASIC5.9□□□□□ -1.47
VPS29Q9UBQ0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
VPS29Q9UBQ0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
VPS29Q9UBQ0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS29Q9UBQ0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
VPS29Q9UBQ0 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
VPS29Q9UBQ0 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.9□□□□□ -1.47
VPS29Q9UBQ0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS29Q9UBQ0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC024587.1-201ENST00000505925 2157 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC011416.1-201ENST00000514947 1732 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 IMMTP1-201ENST00000435590 2219 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 MIR551B-201ENST00000384984 96 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AL731534.1-201ENST00000434711 269 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 ARMC4P1-201ENST00000438905 707 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AL390879.1-201ENST00000439143 386 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 H3F3BP1-201ENST00000440551 403 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 TPM3P3-201ENST00000521343 354 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 NATP-201ENST00000523491 878 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 RNU4ATAC-201ENST00000580972 127 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC012368.3-201ENST00000604190 219 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC011891.2-201ENST00000604949 397 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC008555.7-201ENST00000605008 583 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC141002.1-201ENST00000607025 279 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC022106.1-201ENST00000612834 766 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS29Q9UBQ0 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms