Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM39Q9HCM9 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM39Q9HCM9 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.93□□□□□ -1.3
TRIM39Q9HCM9 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM39Q9HCM9 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM39Q9HCM9 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM39Q9HCM9 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
TRIM39Q9HCM9 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 OR2A3P-202ENST00000641249 1776 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 RN7SKP62-201ENST00000384539 329 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 MIR99A-201ENST00000384906 81 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AL445183.3-201ENST00000414168 502 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 RPL36P18-201ENST00000419316 318 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 MTCO2P21-201ENST00000419780 677 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 CYP4F32P-201ENST00000426492 504 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC007365.2-201ENST00000428806 458 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 PHB2P1-201ENST00000434943 890 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC092473.1-201ENST00000441098 221 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 VN1R25P-201ENST00000443385 738 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 GAPDHP16-201ENST00000448152 962 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 MTND6P5-201ENST00000448266 512 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 CYCSP42-201ENST00000450823 238 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 ST13P21-201ENST00000453250 1098 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC092155.2-201ENST00000454675 477 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 RN7SL868P-201ENST00000485915 303 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 RN7SKP141-201ENST00000516167 338 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 IGLVV-66-201ENST00000523818 341 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC130366.1-201ENST00000526505 1192 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AP001804.2-201ENST00000533932 910 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 ULK4P1-202ENST00000565174 503 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 OR7E19P-202ENST00000589942 844 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC113368.1-201ENST00000603736 382 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC079395.3-201ENST00000615161 484 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC108359.1-201ENST00000616451 1211 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC022079.2-201ENST00000619739 566 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC092159.4-201ENST00000624944 550 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC140479.4-205ENST00000636339 820 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 OR52B5P-204ENST00000641744 3467 ntBASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM39Q9HCM9 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC129502.1-201ENST00000623261 1654 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC092821.3-202ENST00000641304 2767 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC009135.2-201ENST00000624136 1768 ntBASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM39Q9HCM9 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms