Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC008555.7-201ENST00000605008 583 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AC141002.1-201ENST00000607025 279 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 MIR6780B-201ENST00000610307 79 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 MIR6823-201ENST00000622118 61 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AC089999.3-201ENST00000622440 577 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AC063952.1-203ENST00000634410 658 ntBASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RSPO3Q9BXY4 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AP003175.1-201ENST00000641383 6658 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AC217777.1-201ENST00000570034 1471 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AL359091.1-201ENST00000449048 1734 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 SNX18P3-202ENST00000565670 1750 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 RPL11P4-201ENST00000332269 436 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 RN7SKP187-201ENST00000365536 330 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AL121977.1-201ENST00000401636 979 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 RNA5SP198-201ENST00000410376 127 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AL031681.1-201ENST00000443304 400 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 HIGD1AP16-201ENST00000450986 258 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 RN7SL393P-201ENST00000463588 296 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 RNA5SP116-201ENST00000516132 98 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 MIR212-201ENST00000586026 110 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 MIR132-201ENST00000591554 101 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 SMIM12P1-201ENST00000603004 274 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AC012368.3-201ENST00000604190 219 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AC015819.1-201ENST00000613588 663 ntBASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO3Q9BXY4 ZNF402P-201ENST00000404435 3100 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms