Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SLC25A6P5-202ENST00000602729 1038 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AC068722.2-201ENST00000618734 544 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 COG2-201ENST00000366668 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 AL118496.1-201ENST00000440201 1812 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 EIF4BP4-201ENST00000441847 1780 ntBASIC7.89□□□□□ -1.15
USB1Q9BQ65 UNC5D-205ENST00000449677 2448 ntTSL 2 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USB1Q9BQ65 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
USB1Q9BQ65 SERPINB9-201ENST00000380698 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 SNW1-201ENST00000261531 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL049840.1-201ENST00000498989 1404 ntTSL 4 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 ZNF840P-201ENST00000504759 1996 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 MAPK10-343ENST00000641677 2546 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 CRYGA-201ENST00000304502 609 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 OR10T2-201ENST00000334438 945 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 FAM32BP-201ENST00000344033 333 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 Y_RNA.146-201ENST00000363549 102 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC073136.2-201ENST00000417282 849 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC004129.1-201ENST00000417617 796 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC152007.1-201ENST00000428521 224 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 CYP2C58P-201ENST00000436281 475 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 SNX18P2-201ENST00000438540 808 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC015983.1-201ENST00000441577 373 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 BX470209.2-201ENST00000442086 928 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 RPSAP40-201ENST00000442343 891 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL022237.1-201ENST00000446663 358 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC020595.1-201ENST00000456446 533 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC093270.1-201ENST00000482584 486 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC084871.2-201ENST00000503355 464 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 OR7E99P-201ENST00000505750 922 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 RNU6-1046P-201ENST00000516538 107 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 RNU6-794P-201ENST00000517261 64 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AP002802.1-201ENST00000526154 342 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 ANKRD42-206ENST00000528722 954 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC005842.1-201ENST00000537149 678 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC138466.2-201ENST00000540993 304 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 PHBP19-201ENST00000547512 754 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL162311.2-201ENST00000550416 709 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC106028.1-201ENST00000554322 526 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL049873.2-201ENST00000555790 498 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 LINC01444-202ENST00000581211 654 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL109930.1-201ENST00000606932 724 ntTSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL137000.1-201ENST00000610528 1244 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 uc_338.3-201ENST00000613268 181 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 PPARGC1A-218ENST00000617484 1026 ntTSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 MIR7113-201ENST00000621222 59 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 C2orf27A-204ENST00000623058 969 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 LINC00486-201ENST00000414054 1794 ntTSL 4 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms