Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP2Q96SN8 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 AC087752.1-201ENST00000391360 558 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 EEF1B2P8-201ENST00000414101 671 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 AC016769.2-201ENST00000414815 475 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 AC127526.2-201ENST00000426436 775 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 HMGN1P36-201ENST00000446623 298 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 NXT1P1-201ENST00000458481 316 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 AC015802.2-201ENST00000589690 189 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 AL021918.2-201ENST00000613415 194 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 AC129778.1-202ENST00000623812 261 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 AL591379.1-207ENST00000635982 261 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 PABPC1P8-201ENST00000452851 2086 ntBASIC7.15□□□□□ -1.26
CDK5RAP2Q96SN8 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 AC022034.1-201ENST00000512867 2156 ntBASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 RNA5SP350-201ENST00000363298 111 ntBASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 AL353626.3-201ENST00000413399 657 ntBASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 OR7E158P-201ENST00000524483 910 ntBASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 AC119403.2-201ENST00000590960 598 ntBASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.15□□□□□ -1.27
CDK5RAP2Q96SN8 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 LINC01616-201ENST00000561816 2280 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 FAM32BP-201ENST00000344033 333 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 RPS12P17-201ENST00000438591 377 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 OR13K1P-201ENST00000444577 975 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 RN7SL177P-201ENST00000476596 299 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 AC008945.1-201ENST00000505144 499 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 SCARNA21.2-201ENST00000516600 166 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 AC006530.1-201ENST00000555980 571 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 RNA5SP440-201ENST00000612665 119 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 MIR6886-201ENST00000619864 61 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 PDZK1P1-202ENST00000425209 1350 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 RPS2P45-201ENST00000469997 2057 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 AC241584.2-201ENST00000637142 2090 ntBASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP2Q96SN8 AC027088.4-201ENST00000611559 1947 ntBASIC7.13□□□□□ -1.27
CDK5RAP2Q96SN8 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP2Q96SN8 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP2Q96SN8 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CDK5RAP2Q96SN8 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP2Q96SN8 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP2Q96SN8 RNA5SP284-201ENST00000384547 118 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms