Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX18Q96RF0 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX18Q96RF0 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC069282.1-201ENST00000411911 526 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC096644.3-201ENST00000416788 338 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 SNRPEP5-201ENST00000425442 278 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC007365.2-201ENST00000428806 458 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 E2F6P1-201ENST00000428850 745 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC018804.1-201ENST00000430381 618 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC245452.2-201ENST00000435222 392 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC092106.1-201ENST00000444291 373 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 HMGN1P5-201ENST00000448591 263 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 GOT2P2-201ENST00000450663 1251 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC098826.2-201ENST00000452011 651 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AL354872.1-201ENST00000456361 967 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 RN7SL143P-201ENST00000496780 297 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 RPL7L1P7-201ENST00000509986 724 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC112198.4-201ENST00000515450 351 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 IGKV2-4-201ENST00000523070 340 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 RBMS2P1-201ENST00000525031 1226 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX18Q96RF0 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC005000.1-201ENST00000536192 288 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 CD24P2-201ENST00000565486 219 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AL359704.2-201ENST00000604335 521 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AL450270.1-201ENST00000606160 391 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AL163051.2-201ENST00000618976 735 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC126474.2-201ENST00000623268 1750 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC007485.2-201ENST00000623493 1667 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX18Q96RF0 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX18Q96RF0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX18Q96RF0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX18Q96RF0 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX18Q96RF0 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX18Q96RF0 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX18Q96RF0 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AL663061.1-201ENST00000416625 580 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 ARAFP1-201ENST00000422172 605 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 AL121882.1-201ENST00000422893 417 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 MTND2P2-201ENST00000434633 945 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 AL590399.4-201ENST00000436561 601 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC009244.1-201ENST00000450566 258 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 CLIC4P1-201ENST00000453177 535 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 SRP68P2-201ENST00000456184 254 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 RN7SL561P-201ENST00000488553 281 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 RN7SL187P-201ENST00000495587 303 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC108157.1-201ENST00000510511 539 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 MRPS5P3-201ENST00000515577 166 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 RNA5SP318-201ENST00000516352 92 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 IGLC4-201ENST00000517690 248 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 MIR4800-201ENST00000537353 80 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms