Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AL391261.1-201ENST00000555712 1479 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 Y_RNA.62-201ENST00000362840 99 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 RNU6-883P-201ENST00000384597 107 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 OR1F12-201ENST00000402365 945 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 RN7SKP221-201ENST00000410420 301 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 RPEP4-201ENST00000437636 602 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 SEPT14P12-201ENST00000442280 560 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 GAPDHP37-201ENST00000442317 968 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AL020997.1-201ENST00000446554 349 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 ATG10-AS1-201ENST00000504846 648 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AC023968.1-201ENST00000560719 475 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 RN7SL66P-201ENST00000582099 264 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AC091193.1-201ENST00000604640 448 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AL683813.2-201ENST00000605245 502 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AL596275.2-208ENST00000641192 594 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 OFD1P17-201ENST00000437639 3018 ntBASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDK5RAP3Q96JB5 THAP12P8-201ENST00000447914 2115 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AL157831.2-201ENST00000564681 3095 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AC105235.1-201ENST00000623208 1816 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 MTND4P21-201ENST00000453886 1357 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 UBTFL2-201ENST00000411859 1191 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 RPL36P18-201ENST00000419316 318 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 NME1P1-201ENST00000420914 382 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 CR848007.2-201ENST00000424918 787 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 RPL34P27-201ENST00000428810 349 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 NDUFA5P1-201ENST00000433858 341 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AL022324.2-201ENST00000434827 780 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 PA2G4P1-201ENST00000442248 1197 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AL031681.1-201ENST00000443304 400 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AC015524.1-201ENST00000491585 472 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AC037479.1-201ENST00000558361 625 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AC122134.1-202ENST00000569111 1201 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AC010547.7-201ENST00000570323 333 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 MTND2P13-201ENST00000577438 1039 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms