Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 SRRM1P3-201ENST00000426911 2678 ntBASIC10.03□□□□□ -0.8
TOPBP1Q92547 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC10.03□□□□□ -0.8
TOPBP1Q92547 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC10.03□□□□□ -0.8
TOPBP1Q92547 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC10.03□□□□□ -0.8
TOPBP1Q92547 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC10.03□□□□□ -0.8
TOPBP1Q92547 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
TOPBP1Q92547 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
TOPBP1Q92547 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC10.03□□□□□ -0.8
TOPBP1Q92547 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC10.03□□□□□ -0.8
TOPBP1Q92547 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
TOPBP1Q92547 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TOPBP1Q92547 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 U8.4-201ENST00000363626 134 ntBASIC10.02□□□□□ -0.8
TOPBP1Q92547 RNA5SP478-201ENST00000364657 115 ntBASIC10.02□□□□□ -0.8
TOPBP1Q92547 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 RBMY2KP-201ENST00000418221 992 ntBASIC10.02□□□□□ -0.8
TOPBP1Q92547 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC10.02□□□□□ -0.8
TOPBP1Q92547 MIR6810-201ENST00000622701 70 ntBASIC10.02□□□□□ -0.8
TOPBP1Q92547 AC012254.5-201ENST00000623573 478 ntBASIC10.02□□□□□ -0.8
TOPBP1Q92547 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
TOPBP1Q92547 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
TOPBP1Q92547 EEF1A1P24-201ENST00000451469 1378 ntBASIC10.02□□□□□ -0.8
TOPBP1Q92547 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
TOPBP1Q92547 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC10.02□□□□□ -0.8
TOPBP1Q92547 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
TOPBP1Q92547 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TOPBP1Q92547 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TOPBP1Q92547 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC10.02□□□□□ -0.81
TOPBP1Q92547 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TOPBP1Q92547 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC10.02□□□□□ -0.81
TOPBP1Q92547 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TOPBP1Q92547 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
TOPBP1Q92547 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
TOPBP1Q92547 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC10.02□□□□□ -0.81
TOPBP1Q92547 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC10.02□□□□□ -0.81
TOPBP1Q92547 AC005042.1-201ENST00000393397 800 ntBASIC10.02□□□□□ -0.81
TOPBP1Q92547 FABP12P1-201ENST00000401911 322 ntBASIC10.02□□□□□ -0.81
TOPBP1Q92547 RN7SKP166-201ENST00000410812 305 ntBASIC10.02□□□□□ -0.81
TOPBP1Q92547 AC009784.1-201ENST00000426484 460 ntBASIC10.02□□□□□ -0.81
TOPBP1Q92547 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC10.02□□□□□ -0.81
TOPBP1Q92547 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC10.02□□□□□ -0.81
TOPBP1Q92547 OARD1-211ENST00000480585 829 ntTSL 3 BASIC10.02□□□□□ -0.81
TOPBP1Q92547 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TOPBP1Q92547 AC073916.1-201ENST00000545095 130 ntBASIC10.02□□□□□ -0.81
TOPBP1Q92547 TXNP4-201ENST00000575018 310 ntBASIC10.02□□□□□ -0.81
TOPBP1Q92547 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC10.02□□□□□ -0.81
TOPBP1Q92547 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TOPBP1Q92547 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TOPBP1Q92547 AC105342.1-201ENST00000378334 6848 ntBASIC10.01□□□□□ -0.81
TOPBP1Q92547 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TOPBP1Q92547 AC092821.3-202ENST00000641304 2767 ntBASIC10.01□□□□□ -0.81
TOPBP1Q92547 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TOPBP1Q92547 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TOPBP1Q92547 MIR550A3-201ENST00000390735 95 ntBASIC10.01□□□□□ -0.81
TOPBP1Q92547 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 AC245047.2-201ENST00000441060 530 ntBASIC10.01□□□□□ -0.81
TOPBP1Q92547 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TOPBP1Q92547 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 AC073594.1-201ENST00000462065 364 ntBASIC10.01□□□□□ -0.81
TOPBP1Q92547 OR2AO1P-201ENST00000476497 403 ntBASIC10.01□□□□□ -0.81
TOPBP1Q92547 RPL7AP6-201ENST00000477943 801 ntBASIC10.01□□□□□ -0.81
TOPBP1Q92547 AC004453.1-201ENST00000487895 408 ntBASIC10.01□□□□□ -0.81
TOPBP1Q92547 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TOPBP1Q92547 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 OR7E158P-201ENST00000524483 910 ntBASIC10.01□□□□□ -0.81
TOPBP1Q92547 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TOPBP1Q92547 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TOPBP1Q92547 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
TOPBP1Q92547 ALB-209ENST00000503124 1741 ntTSL 5 BASIC10□□□□□ -0.81
TOPBP1Q92547 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms