Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 RACGAP1P-201ENST00000550663 1879 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 RN7SKP15-201ENST00000364742 309 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 OR7E156P-201ENST00000400303 464 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 RN7SKP240-201ENST00000410583 375 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 RFESDP1-201ENST00000422350 461 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 AC245452.2-201ENST00000435222 392 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 GAPDHP59-201ENST00000435908 267 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 AC009963.3-201ENST00000458090 486 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 AC094085.1-201ENST00000468914 584 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 IGKV2-4-201ENST00000523070 340 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 OR1E3-201ENST00000575608 948 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 AC133552.4-201ENST00000576103 676 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 AL049840.5-201ENST00000602827 552 ntBASIC6.05□□□□□ -1.44
TM9SF4Q92544 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TM9SF4Q92544 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.05□□□□□ -1.44
TM9SF4Q92544 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF4Q92544 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 DOCK11P1-201ENST00000553480 5932 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF4Q92544 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF4Q92544 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC074141.1-201ENST00000588129 2995 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF4Q92544 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF4Q92544 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF4Q92544 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF4Q92544 RPL11P4-201ENST00000332269 436 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 RN7SKP269-201ENST00000365545 319 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 RNA5SP198-201ENST00000410376 127 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AL389925.1-201ENST00000432257 728 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 IGLV3-4-201ENST00000432300 244 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 EMC3-AS1-205ENST00000438698 534 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 RPL5P7-201ENST00000444235 813 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 OR2L9P-201ENST00000444456 913 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 RN7SL221P-201ENST00000466190 281 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 AP002453.1-201ENST00000492327 668 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC084033.1-201ENST00000550830 633 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC106785.4-201ENST00000569492 412 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC005726.4-201ENST00000582858 458 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AL034374.2-201ENST00000605281 548 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 AL354950.1-201ENST00000614150 568 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 MIR6085-201ENST00000618314 110 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.04□□□□□ -1.44
TM9SF4Q92544 AC012653.2-201ENST00000621880 420 ntBASIC6.04□□□□□ -1.44
TM9SF4Q92544 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms