Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AL445991.1-201ENST00000450381 475 ntBASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AL008582.1-201ENST00000609612 442 ntBASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AL589743.6-201ENST00000611025 117 ntBASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 LINC02495-203ENST00000636704 242 ntBASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AC027575.3-201ENST00000583058 2747 ntBASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RTN4IP1Q8WWV3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RTN4IP1Q8WWV3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.21□□□□□ -1.57
RTN4IP1Q8WWV3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
RTN4IP1Q8WWV3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.21□□□□□ -1.57
RTN4IP1Q8WWV3 AP001541.1-201ENST00000623322 1904 ntBASIC5.21□□□□□ -1.57
RTN4IP1Q8WWV3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 RN7SKP281-201ENST00000410472 352 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 UBTFL2-201ENST00000411859 1191 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC092651.1-201ENST00000426110 312 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 RPL12P16-201ENST00000431098 498 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AL365220.1-201ENST00000432923 399 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 MED28P4-201ENST00000433137 572 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 OR9A1P-202ENST00000484361 945 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC090058.1-201ENST00000498788 435 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 OR51A1P-201ENST00000511110 946 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 CYP4F27P-201ENST00000514557 494 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC113191.1-201ENST00000517759 403 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 MIR4732-201ENST00000581873 76 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC211486.4-201ENST00000621495 113 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AP001153.1-201ENST00000641024 338 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AC063923.1-201ENST00000478982 1619 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 AL359955.1-201ENST00000455242 3275 ntBASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTN4IP1Q8WWV3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 HDAC1P2-201ENST00000453661 1398 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 SNORD16-201ENST00000362803 99 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 SNORD1C-201ENST00000363315 78 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 RNU6-316P-201ENST00000391027 107 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 VIM2P-201ENST00000402383 1294 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 GPN3P1-201ENST00000423883 535 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AL157884.1-201ENST00000424561 454 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 KATNBL1P2-201ENST00000433311 835 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms