Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE4Q8N205 FTH1P10-202ENST00000430907 550 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 MORF4-201ENST00000447135 971 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 AC023141.9-201ENST00000458734 412 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 RN7SL717P-201ENST00000478343 297 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 RN7SL193P-201ENST00000491708 276 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 AC008638.1-201ENST00000506035 866 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 AC106800.3-201ENST00000511389 308 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 AC092865.1-201ENST00000544395 1023 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 AL513218.1-201ENST00000606527 391 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 AL162574.2-201ENST00000614618 657 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 AP005431.1-201ENST00000618479 319 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 AC245014.3-201ENST00000618589 347 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 MIR7159-201ENST00000620587 66 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 AL136228.1-201ENST00000622221 319 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 AC007342.9-201ENST00000623877 1385 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE4Q8N205 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE4Q8N205 AC104447.1-201ENST00000624214 2124 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE4Q8N205 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE4Q8N205 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE4Q8N205 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE4Q8N205 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 TNPO1P2-201ENST00000426249 2665 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 MAPK10-287ENST00000641217 3037 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 BX323845.3-201ENST00000428215 527 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 TRIM60P13-201ENST00000432350 1283 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 NDUFS5P5-201ENST00000437256 321 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 BTBD7P2-201ENST00000441962 620 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 HMGN1P36-201ENST00000446623 298 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 AC092967.1-201ENST00000449016 481 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 SBDSP1-204ENST00000453858 737 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 MTND3P3-201ENST00000505004 126 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 AP003396.4-201ENST00000527574 265 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 SNORD95-201ENST00000579879 68 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 AC024255.1-201ENST00000614376 102 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 AL132640.3-201ENST00000630473 177 ntBASIC7.78□□□□□ -1.16
SYNE4Q8N205 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNE4Q8N205 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE4Q8N205 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
SYNE4Q8N205 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE4Q8N205 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE4Q8N205 AF287957.1-201ENST00000607368 1595 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 RN7SKP292-201ENST00000365522 317 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 AL132875.1-201ENST00000403623 949 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms