Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 PSMC1P4-201ENST00000515236 1327 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AC009831.5-201ENST00000624000 3189 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 RNU1-59P-201ENST00000364829 162 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 YWHAZP4-201ENST00000392459 708 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 OR2W4P-201ENST00000406496 926 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 RN7SKP296-201ENST00000411185 341 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AC022415.1-202ENST00000486612 523 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AL390198.2-201ENST00000510553 222 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 IGHV1-14-201ENST00000523391 241 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AC233702.7-202ENST00000582941 211 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 DYNLL1P1-201ENST00000595442 269 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AC114477.1-201ENST00000605097 605 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 U1.25-201ENST00000614085 162 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AC005277.2-201ENST00000617898 390 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 U1.34-201ENST00000618578 162 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 U1.31-201ENST00000620022 160 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AL122023.1-201ENST00000622847 530 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 AC010325.3-201ENST00000641084 394 ntBASIC5.95□□□□□ -1.46
CCDC71Q8IV32 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC71Q8IV32 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 RNA5SP77-201ENST00000365394 120 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 RPS26P38-201ENST00000414476 348 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 TRGV5P-201ENST00000419915 354 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 KCTD9P1-201ENST00000430462 1167 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 RPSAP40-201ENST00000442343 891 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 RN7SL39P-201ENST00000462264 297 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 H3F3AP5-201ENST00000475267 429 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AC018797.1-201ENST00000510791 255 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 RNA5SP441-201ENST00000516809 88 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AC084121.1-201ENST00000533882 835 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AL445383.1-201ENST00000554689 874 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AC007494.1-201ENST00000562293 760 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AL589743.6-201ENST00000611025 117 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms