Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
LRRC28Q86X40 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
LRRC28Q86X40 AC022164.1-201ENST00000568767 2673 ntBASIC5.59□□□□□ -1.52
LRRC28Q86X40 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LRRC28Q86X40 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LRRC28Q86X40 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC28Q86X40 PSMC1P6-201ENST00000477233 1319 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 PSMC1P4-201ENST00000515236 1327 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC28Q86X40 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC28Q86X40 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 UBTFL2-201ENST00000411859 1191 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 FAM183DP-201ENST00000421987 399 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 GAPDHP37-201ENST00000442317 968 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 RPL5P10-201ENST00000445207 894 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 RPS18P1-201ENST00000447840 458 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 SNRPCP3-201ENST00000474888 476 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 RN7SL836P-201ENST00000476140 296 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 AC015524.1-201ENST00000491585 472 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 BTG1P1-201ENST00000540396 508 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 AP000619.2-201ENST00000546014 969 ntBASIC5.58□□□□□ -1.52
LRRC28Q86X40 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC28Q86X40 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC28Q86X40 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC28Q86X40 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC28Q86X40 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC28Q86X40 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LRRC28Q86X40 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC28Q86X40 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC28Q86X40 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC28Q86X40 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC28Q86X40 KYNUP3-201ENST00000574386 1341 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 PPIAP24-201ENST00000328558 471 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 SNORD1C-201ENST00000363315 78 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC28Q86X40 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 VIM2P-201ENST00000402383 1294 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 RANP6-201ENST00000413691 644 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 AL929472.1-201ENST00000417484 429 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 MRPS21P5-201ENST00000417885 231 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 COL11A2P1-205ENST00000441798 676 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC092967.1-201ENST00000449016 481 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC236972.4-201ENST00000458091 963 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC022415.1-202ENST00000486612 523 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC138517.1-201ENST00000515724 568 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC28Q86X40 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC245052.7-201ENST00000601161 359 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC015819.1-201ENST00000613588 663 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC010401.2-201ENST00000575137 4934 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 AC087516.1-201ENST00000561236 2428 ntBASIC5.57□□□□□ -1.52
LRRC28Q86X40 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
LRRC28Q86X40 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC28Q86X40 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 3631.8 ms