Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC068769.1-201ENST00000474767 2426 ntBASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 AC083899.2-201ENST00000423285 1376 ntBASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 RPS2P45-201ENST00000469997 2057 ntBASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AL359976.1-201ENST00000418655 3528 ntBASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AL360271.1-201ENST00000395679 510 ntBASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 GPN3P1-201ENST00000423883 535 ntBASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 OR2L9P-201ENST00000444456 913 ntBASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 MORF4-201ENST00000447135 971 ntBASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AL500527.1-201ENST00000448532 255 ntBASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 RN7SL39P-201ENST00000462264 297 ntBASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AC010343.2-201ENST00000510162 224 ntBASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AC009712.1-201ENST00000564938 316 ntBASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 MIR3157-201ENST00000578688 85 ntBASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AC007423.1-201ENST00000605009 627 ntBASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
ZNF549Q6P9A3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AC110716.2-201ENST00000563865 3945 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 OR5T3-201ENST00000303059 1023 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 RNA5SP77-201ENST00000365394 120 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AL451046.1-201ENST00000406097 534 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AL445991.1-201ENST00000450381 475 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 RANP2-201ENST00000456833 229 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AC073594.1-201ENST00000462065 364 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 CAB39P1-201ENST00000502277 460 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 MTND1P36-201ENST00000522384 936 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AP001804.1-201ENST00000526868 919 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 RPAP2P1-201ENST00000603626 1168 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AL591167.1-201ENST00000607321 456 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AP005212.4-201ENST00000614206 710 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AC003001.2-201ENST00000616294 831 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms