Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 RN7SKP292-201ENST00000365522 317 ntBASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 RNU6-167P-201ENST00000384292 106 ntBASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 RN7SKP286-201ENST00000410894 299 ntBASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 CYCSP52-201ENST00000422857 310 ntBASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 MORF4L1P5-201ENST00000433352 961 ntBASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 PPIAP10-201ENST00000438675 458 ntBASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 SEPT14P12-201ENST00000442280 560 ntBASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 AC005077.1-201ENST00000449226 375 ntBASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 IGLV3-6-201ENST00000523937 250 ntBASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 AC009237.12-201ENST00000604755 742 ntBASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 TMSB4XP2-201ENST00000335179 210 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 RNFT1P3-201ENST00000340898 1052 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AL023284.3-201ENST00000407767 334 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC245096.1-201ENST00000413104 546 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 OR6C71P-201ENST00000432580 913 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 RPL36AP39-201ENST00000445859 318 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC023141.9-201ENST00000458734 412 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC095057.1-201ENST00000507583 168 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC112191.2-201ENST00000522428 333 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 FAM72A-208ENST00000607379 1139 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AL352984.2-201ENST00000611153 546 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC022106.1-201ENST00000612834 766 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC022467.1-201ENST00000614738 749 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AL132640.3-201ENST00000630473 177 ntBASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.19□□□□□ -1.42
LYSMD4Q5XG99 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD4Q5XG99 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD4Q5XG99 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD4Q5XG99 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
LYSMD4Q5XG99 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD4Q5XG99 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD4Q5XG99 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.18□□□□□ -1.42
LYSMD4Q5XG99 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD4Q5XG99 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LYSMD4Q5XG99 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms