Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FO393411.1-201ENST00000325612 420 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 RNA5SP483-201ENST00000363431 118 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 Y_RNA.231-201ENST00000364358 102 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC117470.1-201ENST00000381974 330 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 Y_RNA.481-201ENST00000384373 102 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 YWHAZP6-201ENST00000399764 738 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 SNORA73.3-201ENST00000410213 189 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 Y_RNA.598-201ENST00000410480 95 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 RN7SKP39-201ENST00000410773 322 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC244157.1-201ENST00000415642 163 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 AL645936.2-201ENST00000430565 928 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 PIGCP2-201ENST00000433617 835 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 RPS25P9-201ENST00000435591 252 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 RABEPKP1-201ENST00000440529 1026 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 RPS29P16-201ENST00000452798 171 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC239798.3-201ENST00000454459 408 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 RNU6-420P-201ENST00000458780 107 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VARS2Q5ST30 RPL12P20-201ENST00000475538 479 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC018695.1-201ENST00000484096 664 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC090013.1-201ENST00000485147 480 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC024405.1-201ENST00000532521 1042 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 RN7SL311P-201ENST00000579858 306 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 JPT1-211ENST00000581874 517 ntTSL 5 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC012507.3-201ENST00000603556 477 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 AP000654.2-201ENST00000605633 586 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 AC099676.1-201ENST00000608886 657 ntBASIC9.08□□□□□ -0.96
VARS2Q5ST30 SLAMF7-203ENST00000368043 2689 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
VARS2Q5ST30 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VARS2Q5ST30 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VARS2Q5ST30 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VARS2Q5ST30 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VARS2Q5ST30 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VARS2Q5ST30 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VARS2Q5ST30 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VARS2Q5ST30 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
VARS2Q5ST30 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
VARS2Q5ST30 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VARS2Q5ST30 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 AC009044.1-201ENST00000624577 1798 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 Y_RNA.176-201ENST00000363815 109 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 RNU6-707P-201ENST00000364647 95 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 RNU6-308P-201ENST00000390957 107 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 PPIAP2-201ENST00000414143 492 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 TMSB10P1-201ENST00000415070 132 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 GNAI2P2-201ENST00000417003 916 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 AC007562.1-201ENST00000421819 517 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 ELOBP1-201ENST00000447693 357 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 AC092634.4-203ENST00000451395 448 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 NBPF2P-201ENST00000453025 661 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 RN7SL218P-201ENST00000464637 299 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 MTND4P17-201ENST00000470444 350 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 RN7SL135P-201ENST00000490144 278 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 CDH12P2-201ENST00000504393 298 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 AC112206.3-201ENST00000514578 389 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 AC020688.1-201ENST00000519282 1248 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 AC087241.2-201ENST00000535801 324 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 NUPL2-212ENST00000548367 249 ntTSL 5 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 SNRPGP18-201ENST00000553000 214 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 AL390334.1-201ENST00000556395 450 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 AC016727.2-201ENST00000603988 621 ntBASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms