Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 RN7SKP144-201ENST00000411108 279 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 RPS21P8-201ENST00000413365 247 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 AC092865.3-201ENST00000425390 1026 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 PSMD10P2-201ENST00000432890 672 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 OR3D1P-201ENST00000438288 955 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 AL512593.1-201ENST00000444758 779 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 YRDCP3-201ENST00000456507 480 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 RN7SL362P-201ENST00000494228 267 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 AC008945.1-201ENST00000505144 499 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 AC090958.1-201ENST00000511122 351 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 NPIPB14P-203ENST00000532298 987 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 AC141002.1-201ENST00000607025 279 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 SSXP3-201ENST00000442971 1300 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 AC079753.1-201ENST00000623243 3868 ntBASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.49□□□□□ -1.37
PTPN20Q4JDL3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 RNA5SP279-201ENST00000365513 117 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 RN7SKP151-201ENST00000410230 316 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 RPSAP65-201ENST00000429660 595 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 BMP6P1-201ENST00000431230 679 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AC113367.2-201ENST00000505749 160 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AC112484.3-201ENST00000505910 329 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AC021269.1-201ENST00000526860 705 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 BMS1P16-201ENST00000556075 1147 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 SMIM12P1-201ENST00000603004 274 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 RN7SL261P-201ENST00000613441 282 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 uc_338.31-201ENST00000615595 186 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AC023632.6-201ENST00000624338 2177 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AL117378.2-201ENST00000622916 1337 ntBASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN20Q4JDL3 AC007998.4-201ENST00000612496 2533 ntBASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AC022325.1-201ENST00000502748 2199 ntBASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AL451046.1-201ENST00000406097 534 ntBASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AC108479.1-201ENST00000431142 427 ntBASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AL035690.1-201ENST00000490892 383 ntBASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 AL117692.1-201ENST00000494283 713 ntBASIC6.47□□□□□ -1.37
PTPN20Q4JDL3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms