Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX4Q06945 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC025918.2-201ENST00000558683 763 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX4Q06945 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.58□□□□□ -1.2
SOX4Q06945 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC024060.1-201ENST00000607052 494 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 AC073968.1-201ENST00000618594 637 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 AC090617.9-201ENST00000623751 147 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX4Q06945 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 SPATA31C2-201ENST00000324915 3777 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
SOX4Q06945 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.58□□□□□ -1.2
SOX4Q06945 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SOX4Q06945 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
SOX4Q06945 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.58□□□□□ -1.2
SOX4Q06945 CASC19-281ENST00000642118 1554 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
SOX4Q06945 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX4Q06945 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SOX4Q06945 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX4Q06945 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 RN7SKP23-201ENST00000625159 4301 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX4Q06945 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX4Q06945 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 AC009220.2-201ENST00000489759 1751 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.57□□□□□ -1.2
SOX4Q06945 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX4Q06945 OR5H15-201ENST00000383696 930 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SOX4Q06945 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 Z86062.1-201ENST00000406773 777 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 Z68694.1-201ENST00000413929 841 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 RPF2P1-201ENST00000424137 906 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX4Q06945 AC124944.2-201ENST00000429866 1242 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AL022324.2-201ENST00000434827 780 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 DNAJA1P6-201ENST00000437347 354 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 ARL5AP3-201ENST00000439327 386 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AC083855.1-201ENST00000440041 258 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SOX4Q06945 TAF9P1-201ENST00000445421 515 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 GOT2P2-201ENST00000450663 1251 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 RPL23AP23-201ENST00000452590 471 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 TAF9P2-201ENST00000454958 515 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 OSTCP1-201ENST00000455507 450 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 UOX-201ENST00000471089 899 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 RN7SL790P-201ENST00000474043 298 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.57□□□□□ -1.2
SOX4Q06945 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.57□□□□□ -1.2
SOX4Q06945 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 AC138938.1-201ENST00000515431 782 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 RNU6-1028P-201ENST00000517164 93 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SOX4Q06945 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC7.57□□□□□ -1.2
SOX4Q06945 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
SOX4Q06945 AC011447.2-201ENST00000592921 283 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 HMGB1P51-201ENST00000605166 638 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AL353621.2-201ENST00000605340 133 ntBASIC7.57□□□□□ -1.2
SOX4Q06945 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 604.4 ms