Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.61□□□□□ -1.51
H3F3AP84243 RN7SL230P-201ENST00000580835 303 ntBASIC5.61□□□□□ -1.51
H3F3AP84243 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.61□□□□□ -1.51
H3F3AP84243 DYNLL1P1-201ENST00000595442 269 ntBASIC5.61□□□□□ -1.51
H3F3AP84243 AC009237.12-201ENST00000604755 742 ntBASIC5.61□□□□□ -1.51
H3F3AP84243 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.61□□□□□ -1.51
H3F3AP84243 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3F3AP84243 AC093297.3-201ENST00000607056 2517 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3AP84243 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
H3F3AP84243 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
H3F3AP84243 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
H3F3AP84243 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.6□□□□□ -1.51
H3F3AP84243 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3AP84243 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 AP002512.4-202ENST00000641599 4530 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.6□□□□□ -1.51
H3F3AP84243 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
H3F3AP84243 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.6□□□□□ -1.51
H3F3AP84243 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3AP84243 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 RNA5SP346-201ENST00000363541 121 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 MIR433-201ENST00000384837 93 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 AP003170.5-201ENST00000397185 335 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 AL445238.1-204ENST00000400311 463 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 RNA5SP115-201ENST00000411160 107 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3AP84243 RPS27AP3-201ENST00000453803 454 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 RANP2-201ENST00000456833 229 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.6□□□□□ -1.51
H3F3AP84243 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.6□□□□□ -1.51
H3F3AP84243 OR7E22P-201ENST00000478335 1035 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 RPL29P23-201ENST00000486188 442 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 AC095052.1-201ENST00000509955 863 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 NATP-201ENST00000523491 878 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
H3F3AP84243 OR4A41P-201ENST00000533053 928 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 BMS1P16-201ENST00000556075 1147 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.6□□□□□ -1.51
H3F3AP84243 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3AP84243 SETP3-201ENST00000581726 813 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 AL591167.1-201ENST00000607321 456 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.6□□□□□ -1.51
H3F3AP84243 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.6□□□□□ -1.51
H3F3AP84243 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 AC048341.3-201ENST00000619323 491 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3AP84243 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3AP84243 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 AC068769.1-201ENST00000474767 2426 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
H3F3AP84243 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 AC009831.5-201ENST00000624000 3189 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
H3F3AP84243 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.6□□□□□ -1.51
H3F3AP84243 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3F3AP84243 DNM1P47-203ENST00000571780 12667 ntBASIC5.6□□□□□ -1.51
H3F3AP84243 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
H3F3AP84243 AC011504.1-201ENST00000623331 4103 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 AL133243.2-201ENST00000610331 1621 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.59□□□□□ -1.51
H3F3AP84243 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.59□□□□□ -1.51
H3F3AP84243 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3F3AP84243 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3F3AP84243 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.59□□□□□ -1.51
H3F3AP84243 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.59□□□□□ -1.51
H3F3AP84243 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3F3AP84243 RNU1-49P-201ENST00000363468 159 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 MIR188-201ENST00000385034 86 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.59□□□□□ -1.51
H3F3AP84243 RPSAP32-201ENST00000432681 526 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.59□□□□□ -1.51
H3F3AP84243 PPIAP10-201ENST00000438675 458 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 AC016908.1-201ENST00000442571 1219 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.59□□□□□ -1.51
H3F3AP84243 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
H3F3AP84243 HIGD1AP16-201ENST00000450986 258 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 AL133351.3-201ENST00000454998 193 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 AC103563.5-201ENST00000455643 364 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 YRDCP3-201ENST00000456507 480 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 AC005165.2-201ENST00000466070 380 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms