Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PRKDCP78527 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PRKDCP78527 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
PRKDCP78527 SNORA70.4-201ENST00000365509 134 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PRKDCP78527 LINC01881-201ENST00000416103 412 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 AC092570.3-201ENST00000420113 693 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 AC008072.1-201ENST00000434254 824 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 AP002981.1-201ENST00000517692 975 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PRKDCP78527 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.18□□□□□ -1.74
PRKDCP78527 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 ENPEP-201ENST00000265162 6943 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 RNA5SP123-201ENST00000363244 119 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 RN7SKP28-201ENST00000364770 305 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PRKDCP78527 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PRKDCP78527 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKDCP78527 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.18□□□□□ -1.74
PRKDCP78527 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKDCP78527 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.18□□□□□ -1.74
PRKDCP78527 AC078899.1-201ENST00000521432 1185 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKDCP78527 OR6M2P-201ENST00000529831 871 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 AC015720.2-201ENST00000567709 334 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 AL020997.2-201ENST00000602607 184 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 AL161616.1-201ENST00000611867 286 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKDCP78527 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
PRKDCP78527 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC4.18□□□□□ -1.74
PRKDCP78527 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.18□□□□□ -1.74
PRKDCP78527 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC4.18□□□□□ -1.74
PRKDCP78527 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PRKDCP78527 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 MEIS2-202ENST00000338564 4829 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
PRKDCP78527 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKDCP78527 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PRKDCP78527 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKDCP78527 RN7SKP227-201ENST00000364445 330 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 RNU6-398P-201ENST00000384143 109 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 OR4K12P-201ENST00000406538 961 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 CNOT7P1-201ENST00000429006 852 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 RPL32P33-201ENST00000487023 394 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKDCP78527 OR7H2P-201ENST00000513483 306 ntBASIC4.18□□□□□ -1.74
PRKDCP78527 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKDCP78527 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PRKDCP78527 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC4.17□□□□□ -1.74
PRKDCP78527 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PRKDCP78527 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PRKDCP78527 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PRKDCP78527 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRKDCP78527 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC4.17□□□□□ -1.74
PRKDCP78527 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
PRKDCP78527 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.17□□□□□ -1.74
PRKDCP78527 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRKDCP78527 AL133482.1-201ENST00000415988 498 ntBASIC4.17□□□□□ -1.74
PRKDCP78527 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKDCP78527 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.17□□□□□ -1.74
PRKDCP78527 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC4.17□□□□□ -1.74
PRKDCP78527 RPL7P11-201ENST00000437586 658 ntBASIC4.17□□□□□ -1.74
PRKDCP78527 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKDCP78527 AC026402.1-201ENST00000513642 170 ntBASIC4.17□□□□□ -1.74
PRKDCP78527 RNU6-941P-201ENST00000516346 108 ntBASIC4.17□□□□□ -1.74
PRKDCP78527 NRBF2P4-201ENST00000520874 850 ntBASIC4.17□□□□□ -1.74
PRKDCP78527 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.17□□□□□ -1.74
PRKDCP78527 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.17□□□□□ -1.74
PRKDCP78527 AC069307.1-201ENST00000602820 447 ntBASIC4.17□□□□□ -1.74
PRKDCP78527 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRKDCP78527 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms