Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.86□□□□□ -1.31
YBX1P67809 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.85□□□□□ -1.31
YBX1P67809 TPTE2P2-201ENST00000403471 1466 ntBASIC6.85□□□□□ -1.31
YBX1P67809 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.85□□□□□ -1.31
YBX1P67809 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.85□□□□□ -1.31
YBX1P67809 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.85□□□□□ -1.31
YBX1P67809 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
YBX1P67809 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 USP3-201ENST00000268049 5311 ntTSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 AC092725.2-201ENST00000567658 1389 ntBASIC6.85□□□□□ -1.31
YBX1P67809 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
YBX1P67809 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 Y_RNA.194-201ENST00000363985 102 ntBASIC6.85□□□□□ -1.31
YBX1P67809 RNU4-68P-201ENST00000364314 141 ntBASIC6.85□□□□□ -1.31
YBX1P67809 RNA5SP302-201ENST00000364896 100 ntBASIC6.85□□□□□ -1.31
YBX1P67809 MIR27A-201ENST00000385073 78 ntBASIC6.85□□□□□ -1.31
YBX1P67809 MIR640-201ENST00000385086 96 ntBASIC6.85□□□□□ -1.31
YBX1P67809 AC006511.2-201ENST00000388966 660 ntBASIC6.85□□□□□ -1.31
YBX1P67809 SOD1P1-201ENST00000407803 440 ntBASIC6.85□□□□□ -1.31
YBX1P67809 RN7SKP137-201ENST00000411074 307 ntBASIC6.85□□□□□ -1.31
YBX1P67809 SETP22-201ENST00000412243 957 ntBASIC6.85□□□□□ -1.31
YBX1P67809 AL445213.1-201ENST00000412589 747 ntBASIC6.85□□□□□ -1.31
YBX1P67809 RPL30P16-201ENST00000419341 429 ntBASIC6.85□□□□□ -1.31
YBX1P67809 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 AC009500.1-201ENST00000420684 583 ntBASIC6.85□□□□□ -1.31
YBX1P67809 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.85□□□□□ -1.31
YBX1P67809 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.85□□□□□ -1.31
YBX1P67809 CEACAMP5-201ENST00000448037 961 ntBASIC6.85□□□□□ -1.31
YBX1P67809 OR52J1P-201ENST00000450596 932 ntBASIC6.85□□□□□ -1.31
YBX1P67809 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 WBP1LP1-201ENST00000460451 896 ntBASIC6.85□□□□□ -1.31
YBX1P67809 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.85□□□□□ -1.31
YBX1P67809 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.85□□□□□ -1.31
YBX1P67809 AC010374.1-201ENST00000503762 1237 ntBASIC6.85□□□□□ -1.31
YBX1P67809 MTCO1P31-201ENST00000506355 492 ntBASIC6.85□□□□□ -1.31
YBX1P67809 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.85□□□□□ -1.31
YBX1P67809 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.85□□□□□ -1.31
YBX1P67809 RNA5SP518-201ENST00000515957 119 ntBASIC6.85□□□□□ -1.31
YBX1P67809 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.85□□□□□ -1.31
YBX1P67809 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.85□□□□□ -1.31
YBX1P67809 AP001803.1-201ENST00000525668 147 ntBASIC6.85□□□□□ -1.31
YBX1P67809 AP003461.1-201ENST00000528866 78 ntBASIC6.85□□□□□ -1.31
YBX1P67809 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.85□□□□□ -1.31
YBX1P67809 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 OR7E161P-201ENST00000533722 967 ntBASIC6.85□□□□□ -1.31
YBX1P67809 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.85□□□□□ -1.31
YBX1P67809 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.85□□□□□ -1.31
YBX1P67809 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.85□□□□□ -1.31
YBX1P67809 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.85□□□□□ -1.31
YBX1P67809 FAM30C-201ENST00000561158 410 ntBASIC6.85□□□□□ -1.31
YBX1P67809 AC007346.2-201ENST00000564816 892 ntBASIC6.85□□□□□ -1.31
YBX1P67809 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.85□□□□□ -1.31
YBX1P67809 AC002069.2-201ENST00000603580 883 ntBASIC6.85□□□□□ -1.31
YBX1P67809 AL078624.2-201ENST00000605063 554 ntBASIC6.85□□□□□ -1.31
YBX1P67809 AL133243.1-201ENST00000614487 366 ntBASIC6.85□□□□□ -1.31
YBX1P67809 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 AC103564.3-201ENST00000621194 220 ntBASIC6.85□□□□□ -1.31
YBX1P67809 AL132796.3-201ENST00000624703 900 ntBASIC6.85□□□□□ -1.31
YBX1P67809 AP003400.5-201ENST00000624827 617 ntBASIC6.85□□□□□ -1.31
YBX1P67809 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.85□□□□□ -1.31
YBX1P67809 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.85□□□□□ -1.31
YBX1P67809 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
YBX1P67809 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.85□□□□□ -1.31
YBX1P67809 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
YBX1P67809 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
YBX1P67809 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
YBX1P67809 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
YBX1P67809 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
YBX1P67809 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.84□□□□□ -1.31
YBX1P67809 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
YBX1P67809 AC023886.2-201ENST00000321285 411 ntBASIC6.84□□□□□ -1.31
YBX1P67809 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
YBX1P67809 FAM204BP-201ENST00000369171 701 ntBASIC6.84□□□□□ -1.31
YBX1P67809 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
YBX1P67809 RNU6-636P-201ENST00000384598 107 ntBASIC6.84□□□□□ -1.31
YBX1P67809 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
YBX1P67809 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 629.4 ms