Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RHBDL3P58872 AC004386.1-201ENST00000393214 761 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 RPL7AP14-201ENST00000424041 802 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 GAPDHP75-201ENST00000433910 943 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 EIF5AP4-201ENST00000441206 465 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.57□□□□□ -1.2
RHBDL3P58872 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.57□□□□□ -1.2
RHBDL3P58872 RN7SL326P-201ENST00000477493 296 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 SNORA58-201ENST00000505219 137 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.57□□□□□ -1.2
RHBDL3P58872 RNU6-362P-201ENST00000516736 90 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.57□□□□□ -1.2
RHBDL3P58872 NANOGNBP2-201ENST00000544753 553 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.57□□□□□ -1.2
RHBDL3P58872 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.57□□□□□ -1.2
RHBDL3P58872 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.57□□□□□ -1.2
RHBDL3P58872 AL133406.3-201ENST00000606817 541 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.57□□□□□ -1.2
RHBDL3P58872 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.57□□□□□ -1.2
RHBDL3P58872 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RHBDL3P58872 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.57□□□□□ -1.2
RHBDL3P58872 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.57□□□□□ -1.2
RHBDL3P58872 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.57□□□□□ -1.2
RHBDL3P58872 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
RHBDL3P58872 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.57□□□□□ -1.2
RHBDL3P58872 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.57□□□□□ -1.2
RHBDL3P58872 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RHBDL3P58872 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
RHBDL3P58872 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RHBDL3P58872 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RHBDL3P58872 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
RHBDL3P58872 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.56□□□□□ -1.2
RHBDL3P58872 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
RHBDL3P58872 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RHBDL3P58872 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RHBDL3P58872 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RHBDL3P58872 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RHBDL3P58872 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RHBDL3P58872 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
RHBDL3P58872 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RHBDL3P58872 RN7SKP269-201ENST00000365545 319 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 AC083799.1-201ENST00000366451 910 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 ARAFP1-201ENST00000422172 605 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 AC023141.3-201ENST00000436698 278 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 LDHAP2-201ENST00000437325 985 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 PPIAP7-201ENST00000454070 489 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.56□□□□□ -1.2
RHBDL3P58872 AC009963.3-201ENST00000458090 486 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC7.56□□□□□ -1.2
RHBDL3P58872 RPL34P33-201ENST00000486062 334 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 LSM3P4-201ENST00000502948 309 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.56□□□□□ -1.2
RHBDL3P58872 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.56□□□□□ -1.2
RHBDL3P58872 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.56□□□□□ -1.2
RHBDL3P58872 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.56□□□□□ -1.2
RHBDL3P58872 IGKV2-4-201ENST00000523070 340 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 AP000620.1-201ENST00000527147 504 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.56□□□□□ -1.2
RHBDL3P58872 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RHBDL3P58872 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.56□□□□□ -1.2
RHBDL3P58872 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.56□□□□□ -1.2
RHBDL3P58872 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
RHBDL3P58872 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.56□□□□□ -1.2
RHBDL3P58872 AL591167.1-201ENST00000607321 456 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 AL008723.3-201ENST00000608926 449 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 AC092266.1-201ENST00000610958 165 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.56□□□□□ -1.2
RHBDL3P58872 AC107308.1-201ENST00000615897 301 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RHBDL3P58872 MTCO1P28-201ENST00000574177 1528 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 AC007406.5-201ENST00000570140 3170 ntBASIC7.56□□□□□ -1.2
RHBDL3P58872 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.56□□□□□ -1.2
RHBDL3P58872 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.56□□□□□ -1.2
RHBDL3P58872 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.55□□□□□ -1.2
RHBDL3P58872 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.55□□□□□ -1.2
RHBDL3P58872 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RHBDL3P58872 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.55□□□□□ -1.2
RHBDL3P58872 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RHBDL3P58872 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.55□□□□□ -1.2
RHBDL3P58872 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RHBDL3P58872 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RHBDL3P58872 MIR130B-202ENST00000385018 82 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC7.55□□□□□ -1.2
RHBDL3P58872 AC007064.3-201ENST00000422608 359 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 HIGD1AP16-201ENST00000450986 258 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.55□□□□□ -1.2
RHBDL3P58872 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RHBDL3P58872 MTND6P8-201ENST00000503471 522 ntBASIC7.55□□□□□ -1.2
RHBDL3P58872 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms